RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 LPAR6P43657 344 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
VRK3-203ENST00000424804 PPP5CP53041 499 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 ERVK-16P61578 105 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 SCGB2B2Q4G0G5 96 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 OR4A47Q6IF82 309 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 SPIN2AQ99865 258 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 SPIN2BQ9BPZ2 258 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 AIFM2Q9BRQ8 373 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 GAR1Q9NY12 217 aaKnown RBP9.93□□□□□ -0.82
VRK3-203ENST00000424804 MTFP1Q9UDX5 166 aa9.93□□□□□ -0.82
VRK3-203ENST00000424804 GABARAPH6UMI1 98 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 RAB3DO95716 219 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 OR9G9P0C7N8 305 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 NQO2P16083 231 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 TAS2R31P59538 309 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 RPL8P62917 257 aaKnown RBP9.92□□□□□ -0.82
VRK3-203ENST00000424804 LPCAT3Q6P1A2 487 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 IL34Q6ZMJ4 242 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 TBC1D26Q86UD7 250 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 HAPLN4Q86UW8 402 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 PUSL1Q8N0Z8 303 aaKnown RBP9.92□□□□□ -0.82
VRK3-203ENST00000424804 TMEM167AQ8TBQ9 72 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 CD300LFQ8TDQ1 290 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 TMEM68Q96MH6 324 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 TM2D3Q9BRN9 247 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 SLIRPQ9GZT3 109 aaKnown RBP9.92□□□□□ -0.82
VRK3-203ENST00000424804 TMEM140Q9NV12 185 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 C19orf73Q9NVV2 129 aa9.92□□□□□ -0.82
VRK3-203ENST00000424804 TRAV3A0A0B4J244 114 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 A0A0G2JLM5 398 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 H3BUA1 57 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 RBFOX2O43251 390 aaKnown RBP eCLIP9.91□□□□□ -0.82
VRK3-203ENST00000424804 KRASP01116 189 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 REG1AP05451 166 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 PI3P19957 117 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 F2RP25116 425 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 TAS2R19P59542 299 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 FAAP20Q6NZ36 180 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 STEAP1BQ6NZ63 245 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 C19orf35Q6ZS72 473 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 SLC38A6Q8IZM9 456 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 TMEM229BQ8NBD8 167 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 OR4D10Q8NGI6 311 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 DGCR14Q96DF8 476 aaKnown RBP9.91□□□□□ -0.82
VRK3-203ENST00000424804 RSRP1Q9BUV0 290 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 HINT2Q9BX68 163 aa9.91□□□□□ -0.82
VRK3-203ENST00000424804 RSL24D1Q9UHA3 163 aaKnown RBP9.91□□□□□ -0.82
VRK3-203ENST00000424804 FABP12A6NFH5 140 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 A8MZ25 164 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 RBMXL2O75526 392 aaKnown RBP9.9□□□□□ -0.82
VRK3-203ENST00000424804 IL6RP08887 468 aaPredicted RBP9.9□□□□□ -0.82
VRK3-203ENST00000424804 HLA-GP17693 338 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 MAS1LP35410 378 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 G6PCP35575 357 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 MRPS10P82664 201 aaKnown RBP9.9□□□□□ -0.82
VRK3-203ENST00000424804 ADAD2Q8NCV1 583 aaKnown RBP9.9□□□□□ -0.82
VRK3-203ENST00000424804 OR4A5Q8NH83 315 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 THAP7Q9BT49 309 aaPredicted RBP9.9□□□□□ -0.82
VRK3-203ENST00000424804 COMMD5Q9GZQ3 224 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 PLEKHA2Q9HB19 425 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 BET1LQ9NYM9 111 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 COMMD9Q9P000 198 aa9.9□□□□□ -0.82
VRK3-203ENST00000424804 MARCH11A6NNE9 402 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 E7EUB6 86 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 UPK2O00526 184 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 OR2J3O76001 311 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 TPPPO94811 219 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 IGHV4-30-4P0DP06 118 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 DEFA4P12838 97 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 AREGP15514 252 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 TNFSF8P32971 234 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 RHOGP84095 191 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 KLF5Q13887 457 aaPredicted RBP9.89□□□□□ -0.83
VRK3-203ENST00000424804 SLC25A42Q86VD7 318 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 ARRDC1Q8N5I2 433 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 OR6Q1Q8NGQ2 317 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 SMIM4Q8WVI0 70 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 CITED4Q96RK1 184 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 EDA2RQ9HAV5 297 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 RANGRFQ9HD47 186 aaPredicted RBP9.89□□□□□ -0.83
VRK3-203ENST00000424804 AKIP1Q9NQ31 210 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 SLC2A9Q9NRM0 540 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 NSG2Q9Y328 171 aa9.89□□□□□ -0.83
VRK3-203ENST00000424804 DISC1C4P0D8 188 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 SNAPC5O75971 98 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 BRI3O95415 125 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 AKAIN1P0CW23 69 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 TBPP20226 339 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 S100A5P33763 92 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 MECP2P51608 486 aaKnown RBP9.88□□□□□ -0.83
VRK3-203ENST00000424804 UCP3P55916 312 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 PIGPP57054 158 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 OR2B8PP59922 312 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 ZNF45Q02386 682 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
VRK3-203ENST00000424804 EXOSC2Q13868 293 aaKnown RBP9.88□□□□□ -0.83
VRK3-203ENST00000424804 ZNF585BQ52M93 769 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms