RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 PPIFP30405 207 aaKnown RBP13.34□□□□□ -0.27
FOXN4-203ENST00000423960 RPL27AP46776 148 aaKnown RBP13.34□□□□□ -0.27
FOXN4-203ENST00000423960 SRPXP78539 464 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 ECSCRQ19T08 205 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 UNQ5815/PRO19632Q6UWF5 114 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 SHISA2Q6UWI4 295 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 C10orf99Q6UWK7 81 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 LGI3Q8N145 548 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 C11orf44Q8N8P7 122 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 MINDY2Q8NBR6 621 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 OR4A16Q8NH70 328 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 RNASE11Q8TAA1 199 aaKnown RBP13.34□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM68Q96MH6 324 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 PHB2Q99623 299 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 CITED1Q99966 193 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 ALX4Q9H161 411 aaPredicted RBP13.34□□□□□ -0.27
FOXN4-203ENST00000423960 FKBP11Q9NYL4 201 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 PRR13Q9NZ81 148 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 TRAV6A0A075B6T7 132 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 PIGBOS1A0A0B4J2F0 54 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 C9orf170A2RU37 121 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 FBXO24O75426 580 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 OPN1MWP04001 364 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 P0C879 139 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 OPN1MW2P0DN77 364 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 OPN1MW3P0DN78 364 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 CD28P10747 220 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 MYOD1P15172 320 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 CFHR3Q02985 330 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 C19orf54Q5BKX5 351 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 C10orf55Q5SWW7 151 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 TEX38Q6PEX7 206 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 COMMD1Q8N668 190 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 DUSP18Q8NEJ0 188 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 OR4X2Q8NGF9 303 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 CASTOR1Q8WTX7 329 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 SPIN2AQ99865 258 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 SPIN2BQ9BPZ2 258 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 COMMD5Q9GZQ3 224 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 NUDT15Q9NV35 164 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 PRNDQ9UKY0 176 aa13.33□□□□□ -0.28
FOXN4-203ENST00000423960 TEX50A0A1B0GTY4 177 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 E7EUB6 86 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 IGHG4P01861 327 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 RAB25P57735 213 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 IZUMO4Q1ZYL8 232 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 ANKRD55Q3KP44 614 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 C4orf46Q504U0 113 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 NRARPQ7Z6K4 114 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 FYTTD1Q96QD9 318 aaKnown RBP13.32□□□□□ -0.28
FOXN4-203ENST00000423960 FOXA2Q9Y261 457 aaPredicted RBP13.32□□□□□ -0.28
FOXN4-203ENST00000423960 OR51B2Q9Y5P1 312 aa13.32□□□□□ -0.28
FOXN4-203ENST00000423960 PLXNB1O43157 2135 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 A0A0B4J293 547 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 A0A0B4J2A0 478 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 A0A1W2PN81 502 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 C15orf61A6NNL5 157 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 RBMXL2O75526 392 aaKnown RBP13.31□□□□□ -0.28
FOXN4-203ENST00000423960 HLA-AP01891 365 aaKnown RBP13.31□□□□□ -0.28
FOXN4-203ENST00000423960 APELAP0DMC3 54 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 CHRNA7P36544 502 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 OR2B8PP59922 312 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 CD83Q01151 205 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 DHRS2Q13268 280 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 FOXE3Q13461 319 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 TCTEX1D4Q5JR98 221 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 ASPHD1Q5U4P2 390 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 LYZL2Q7Z4W2 148 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 LYG2Q86SG7 212 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 SLC35G3Q8N808 338 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 LRTM2Q8N967 370 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 OR5T1Q8NG75 326 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 OR1L8Q8NGR8 309 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 LSM10Q969L4 123 aaKnown RBP13.31□□□□□ -0.28
FOXN4-203ENST00000423960 GPR146Q96CH1 333 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 TMEM14BQ9NUH8 114 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 SHPKQ9UHJ6 478 aa13.31□□□□□ -0.28
FOXN4-203ENST00000423960 A0A0G2JRQ6 117 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 A0A1B0GW64 132 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 TCRBV4S1A1TA0A5B7 111 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 HMX3A6NHT5 357 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 TEX22C9J3V5 150 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 ELANEP08246 267 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 TRAPPC2P0DI81 140 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 TRAPPC2BP0DI82 140 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 MECP2P51608 486 aaKnown RBP13.3□□□□□ -0.28
FOXN4-203ENST00000423960 CXorf66Q5JRM2 361 aaPredicted RBP13.3□□□□□ -0.28
FOXN4-203ENST00000423960 TMEM65Q6PI78 240 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 PLET1Q6UQ28 207 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 OR5M8Q8NGP6 311 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 OR5B3Q8NH48 314 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 CITED2Q99967 270 aaPredicted RBP13.3□□□□□ -0.28
FOXN4-203ENST00000423960 QTRT1Q9BXR0 403 aaKnown RBP13.3□□□□□ -0.28
FOXN4-203ENST00000423960 PALMDQ9NP74 551 aa13.3□□□□□ -0.28
FOXN4-203ENST00000423960 DUXBA0A1W2PPF3 345 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 CGB1A6NKQ9 187 aa13.29□□□□□ -0.28
FOXN4-203ENST00000423960 DBX1A6NMT0 343 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms