RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 A0A0D9SEW6 157 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 TRBV6-5A0A0K0K1A5 114 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 MEIS3P1A6NDR6 274 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 C21orf140B9A014 251 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 LST1O00453 97 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 LEPROTO15243 131 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 NOS1APO75052 506 aaPredicted RBP1.13□□□□□ -2.23
LINC00397-201ENST00000422074 ZNF737O75373 536 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 TFPTP0C1Z6 253 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 FAM228BP0C875 321 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 TRGC1P0CF51 173 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 ZNF705DP0CH99 300 aaPredicted RBP1.13□□□□□ -2.23
LINC00397-201ENST00000422074 CCL1P22362 96 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 NAA20P61599 178 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 POLR2GP62487 172 aaKnown RBP eCLIP1.13□□□□□ -2.23
LINC00397-201ENST00000422074 ELOBQ15370 118 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 NDUFA5Q16718 116 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 TNFAIP8L3Q5GJ75 292 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 GLT8D1Q68CQ7 371 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 ZNF550Q7Z398 422 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 RPP25LQ8N5L8 163 aaKnown RBP1.13□□□□□ -2.23
LINC00397-201ENST00000422074 OR5B17Q8NGF7 314 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 SGMS2Q8NHU3 365 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 MBD3L1Q8WWY6 194 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 ANKRD7Q92527 254 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 ERMAPQ96PL5 475 aaPredicted RBP1.13□□□□□ -2.23
LINC00397-201ENST00000422074 CHST6Q9GZX3 395 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 PAQR5Q9NXK6 330 aaPredicted RBP1.13□□□□□ -2.23
LINC00397-201ENST00000422074 LSM5Q9Y4Y9 91 aaKnown RBP1.13□□□□□ -2.23
LINC00397-201ENST00000422074 TIMM22Q9Y584 194 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 C9orf84Q5VXU9 1444 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 CR1P17927 2039 aa1.13□□□□□ -2.23
LINC00397-201ENST00000422074 GGT3PA6NGU5 568 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 SLC22A1O15245 554 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 TNNC2P02585 160 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 ANGP03950 147 aaKnown RBP1.12□□□□□ -2.23
LINC00397-201ENST00000422074 CALB1P05937 261 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 SRP19P09132 144 aaKnown RBP1.12□□□□□ -2.23
LINC00397-201ENST00000422074 ZNF705BP0CI00 300 aaPredicted RBP1.12□□□□□ -2.23
LINC00397-201ENST00000422074 ARL14EPLP0DKL9 152 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 SULT1A3P0DMM9 295 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 SULT1A4P0DMN0 295 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 REG1BP48304 166 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 MARCKSL1P49006 195 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 TCL1AP56279 114 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 NNATQ16517 81 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 FAM27BQ5VT28 67 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 CD200R1LQ6Q8B3 271 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 OR51D1Q8NGF3 324 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 OR51I1Q9H343 314 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 RSL24D1Q9UHA3 163 aaKnown RBP1.12□□□□□ -2.23
LINC00397-201ENST00000422074 FUT9Q9Y231 359 aa1.12□□□□□ -2.23
LINC00397-201ENST00000422074 IGKV2-40A0A087WW87 121 aaPredicted RBP1.11□□□□□ -2.23
LINC00397-201ENST00000422074 EVPLLA8MZ36 301 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 DCTN3O75935 186 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 CIAO1O76071 339 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 IGKV2D-40P01614 121 aaPredicted RBP1.11□□□□□ -2.23
LINC00397-201ENST00000422074 ISG15P05161 165 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 RPSAP08865 295 aaKnown RBP1.11□□□□□ -2.23
LINC00397-201ENST00000422074 NFYAP23511 347 aaPredicted RBP1.11□□□□□ -2.23
LINC00397-201ENST00000422074 HLA-DMBP28068 263 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 EIF2B2P49770 351 aaKnown RBP1.11□□□□□ -2.23
LINC00397-201ENST00000422074 MAGOHP61326 146 aaKnown RBP1.11□□□□□ -2.23
LINC00397-201ENST00000422074 GRK1Q15835 563 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 ACSM3Q53FZ2 586 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 C10orf67Q8IYJ2 551 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 DEFB125Q8N687 156 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 OR1M1Q8NGA1 313 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 GPR32P1Q8NGA4 272 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 OPTNQ96CV9 577 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 CNBD2Q96M20 576 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 Q96M85 177 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 HSPB9Q9BQS6 159 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 SOX21Q9Y651 276 aaPredicted RBP1.11□□□□□ -2.23
LINC00397-201ENST00000422074 DOCK10Q96BY6 2186 aa1.11□□□□□ -2.23
LINC00397-201ENST00000422074 SCAF11Q99590 1463 aaKnown RBP1.11□□□□□ -2.23
LINC00397-201ENST00000422074 CPAMD8Q8IZJ3 1885 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 OR51F1A6NGY5 319 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 SDCBPO00560 298 aaPredicted RBP1.1□□□□□ -2.23
LINC00397-201ENST00000422074 IGHV3-7P01780 117 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 IL9P15248 144 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 TNFAIP6P98066 277 aaPredicted RBP1.1□□□□□ -2.23
LINC00397-201ENST00000422074 ARHGAP11BQ3KRB8 267 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 CDKL4Q5MAI5 379 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 HIST2H3PS2Q5TEC6 136 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 FAM173BQ6P4H8 233 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 FP248Q71RG6 208 aaPredicted RBP1.1□□□□□ -2.23
LINC00397-201ENST00000422074 DYNAPQ8N1N2 210 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 IL36BQ9NZH7 164 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 PTPRSQ13332 1948 aa1.1□□□□□ -2.23
LINC00397-201ENST00000422074 MAP3K5Q99683 1374 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 IGKV3D-7A0A0C4DH55 119 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 IGKV3OR2-268A0A0C4DH90 116 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 TRBV10-2A0A0K0K1G8 114 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 IRGMA1A4Y4 181 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 SMIM23A6NLE4 172 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 KCNK1O00180 336 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 CCL5P13501 91 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 MOGQ16653 247 aa1.09□□□□□ -2.23
LINC00397-201ENST00000422074 LPCAT4Q643R3 524 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms