RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 IL9P15248 144 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 MBD3L1Q8WWY6 194 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 RPP21Q9H633 154 aaKnown RBP10.49□□□□□ -0.73
CLCN4-203ENST00000421085 hCG_38984A0A1B0GV85 526 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 FAM106CPP0CH98 169 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 ZNF56Q15929 161 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 ZNF525Q8N782 197 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 KLF14Q8TD94 323 aaPredicted RBP10.49□□□□□ -0.73
CLCN4-203ENST00000421085 DIRC2Q96SL1 478 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 NBEAP1P0C6P0 100 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 SAPCD1Q5SSQ6 148 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 AICDAQ9GZX7 198 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 A0A1B0GUT8 65 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 C1QTNF9P0C862 333 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 GFI1BQ5VTD9 330 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 MOB4Q9Y3A3 225 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 OR5P3Q8WZ94 311 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 TMEM54Q969K7 222 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 WNT9BO14905 357 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 RNASE7Q9H1E1 156 aaKnown RBP10.48□□□□□ -0.73
CLCN4-203ENST00000421085 PMS2CLQ68D20 193 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 SIPA1L3O60292 1781 aaPredicted RBP10.48□□□□□ -0.73
CLCN4-203ENST00000421085 COLCA2A8K830 154 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 NDUFA3O95167 84 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 WDR82Q6UXN9 313 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 HIST3H2BBQ8N257 126 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
CLCN4-203ENST00000421085 A0A1W2PQM1 296 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 ATP5LO75964 103 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 MIR17HGQ75NE6 70 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 C18orf12Q96KH6 178 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 FOXD3Q9UJU5 478 aaPredicted RBP10.47□□□□□ -0.73
CLCN4-203ENST00000421085 MRPS16Q9Y3D3 137 aaKnown RBP10.47□□□□□ -0.73
CLCN4-203ENST00000421085 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 TRAV24A0A0B4J272 114 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 PGPEP1LA6NFU8 196 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 H0YIZ8 118 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 LINC00614P0C842 121 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 PF4V1P10720 104 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 NUDT11Q96G61 164 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 RIPPLY2Q5TAB7 128 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 SCGB3A1Q96QR1 104 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 USP54Q70EL1 1684 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 TRAV9-2A0A087WT02 112 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 C17orf98A8MV24 154 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 SSBP4Q9BWG4 385 aaPredicted RBP10.47□□□□□ -0.73
CLCN4-203ENST00000421085 OR13C6PQ8NH95 151 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 DMRTA2Q96SC8 542 aa10.47□□□□□ -0.73
CLCN4-203ENST00000421085 IGKV1D-43A0A0B4J1Z2 117 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 STRCQ7RTU9 1775 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 SIGMAR1Q99720 223 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 IFI27L2Q9H2X8 130 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 ATG2BQ96BY7 2078 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 MCM3APO60318 1980 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 TMEM50AO95807 157 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 COX5BP10606 129 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 CCL20P78556 96 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 C10orf128Q5T292 105 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 VCX2Q9H322 139 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 SPTBP11277 2137 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 TRAV8-2A0A0B4J237 113 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 CXCL1P09341 107 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 TMEM95Q3KNT9 176 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 APOBEC4Q8WW27 367 aaKnown RBP10.46□□□□□ -0.73
CLCN4-203ENST00000421085 FMC1Q96HJ9 113 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 NHP2Q9NX24 153 aaKnown RBP10.46□□□□□ -0.73
CLCN4-203ENST00000421085 ZNF257Q9Y2Q1 563 aa10.46□□□□□ -0.73
CLCN4-203ENST00000421085 IGHV3-35A0A0C4DH35 117 aa10.46□□□□□ -0.74
CLCN4-203ENST00000421085 RRN3P1Q2M238 152 aa10.46□□□□□ -0.74
CLCN4-203ENST00000421085 RP1P56715 2156 aa10.46□□□□□ -0.74
CLCN4-203ENST00000421085 ATP5IP56385 69 aaPredicted RBP10.46□□□□□ -0.74
CLCN4-203ENST00000421085 DDB2Q92466 427 aa10.46□□□□□ -0.74
CLCN4-203ENST00000421085 ELOVL5Q9NYP7 299 aa10.46□□□□□ -0.74
CLCN4-203ENST00000421085 IGKV3OR2-268A0A0C4DH90 116 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 A0A1W2PRS3 328 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 PATE3B3GLJ2 98 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 NDUFS8O00217 210 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 C1orf185Q5T7R7 199 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 OR5A1Q8NGJ0 315 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 DNAJC13O75165 2243 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 SFTA2Q6UW10 78 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 TMEM186Q96B77 213 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 NPIPB13A6NJU9 1138 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 NPIPB4C9JG80 1138 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 IGFBP3P17936 291 aaPredicted RBP10.45□□□□□ -0.74
CLCN4-203ENST00000421085 PAPPA-AS1Q5QFB9 102 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 ANAPC13Q9BS18 74 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 OTOFQ9HC10 1997 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 KIAA0100Q14667 2235 aaKnown RBP10.45□□□□□ -0.74
CLCN4-203ENST00000421085 PAPPA2Q9BXP8 1791 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 AMBPP02760 352 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 NUTF2P61970 127 aaKnown RBP10.45□□□□□ -0.74
CLCN4-203ENST00000421085 NUP37Q8NFH4 326 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 WFDC1Q9HC57 220 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 M0R381 172 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 GREM1O60565 184 aa10.45□□□□□ -0.74
CLCN4-203ENST00000421085 NDUFS6O75380 124 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms