RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 STPG3Q8N7X2 389 aa13.11□□□□□ -0.31
TRIM13-204ENST00000420995 MRPL18Q9H0U6 180 aaKnown RBP13.11□□□□□ -0.31
TRIM13-204ENST00000420995 TMEM106BQ9NUM4 274 aa13.11□□□□□ -0.31
TRIM13-204ENST00000420995 LSM4Q9Y4Z0 139 aaKnown RBP13.11□□□□□ -0.31
TRIM13-204ENST00000420995 TET2Q6N021 2002 aaPredicted RBP13.11□□□□□ -0.31
TRIM13-204ENST00000420995 CDKN1AP38936 164 aa13.11□□□□□ -0.31
TRIM13-204ENST00000420995 TMPRSS3P57727 454 aa13.11□□□□□ -0.31
TRIM13-204ENST00000420995 FAM214BQ7L5A3 538 aa13.11□□□□□ -0.31
TRIM13-204ENST00000420995 IGHV3OR15-7A0A075B7D8 119 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 YPEL1O60688 119 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 CECR9P0C854 216 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 RAB4AP20338 218 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 HOXC12P31275 282 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 TDGF1P3P51864 188 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 OR5I1Q13606 314 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 KRTCAP3Q53RY4 240 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 VWA1Q6PCB0 445 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
TRIM13-204ENST00000420995 FAM90A1Q86YD7 464 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 YPEL2Q96QA6 119 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 TXNDC17Q9BRA2 123 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 IFI27L2Q9H2X8 130 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 IL36BQ9NZH7 164 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 IGKV1D-17A0A075B6S4 117 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 CRISP2P16562 243 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 SELENOTP62341 195 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 OR52E5Q8NH55 327 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 S1PR3Q99500 378 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
TRIM13-204ENST00000420995 FAM90A9PA6NNJ1 464 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 ACTL6BO94805 426 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 MYOD1P15172 320 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 IER3P46695 156 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 TPTE2P1Q5T6R2 138 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 ZNRF1Q8ND25 227 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 OR4P4Q8NGL7 312 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 NPVFQ9HCQ7 196 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 CLCF1Q9UBD9 225 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 CGAP01215 116 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 LOXL3P58215 753 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 OR2Z1Q8NG97 314 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 OR1L6Q8NGR2 347 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 FAM122AQ96E09 287 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 FER1L6-AS2Q96M78 137 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 JPT1Q9UK76 154 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 AHRRA9YTQ3 701 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 FCN1O00602 326 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 TPPP2P59282 170 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 TEPPQ6URK8 271 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 PAM16Q9Y3D7 125 aa13.09□□□□□ -0.31
TRIM13-204ENST00000420995 SPINK4O60575 86 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 IGFBP2P18065 325 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 LGALS4P56470 323 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 RHOBP62745 196 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 TRAT1Q6PIZ9 186 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 EAF1Q96JC9 268 aaPredicted RBP13.08□□□□□ -0.32
TRIM13-204ENST00000420995 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 SMG1Q96Q15 3661 aaKnown RBP13.08□□□□□ -0.32
TRIM13-204ENST00000420995 SNURFLB1AK76 121 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 NPY1RP25929 384 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 SPRNQ5BIV9 151 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 MIR17HGQ75NE6 70 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 BAGE3Q86Y29 109 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 BAGE2Q86Y30 109 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 MMD2Q8IY49 270 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 SLC24A4Q8NFF2 622 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 HINT2Q9BX68 163 aa13.08□□□□□ -0.32
TRIM13-204ENST00000420995 C15orf61A6NNL5 157 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 CYB5R2Q6BCY4 276 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 OR8I2Q8N0Y5 310 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 VN1R17PQ8TDU5 208 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 RNF114Q9Y508 228 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 A6NNC1 897 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 CA2P00918 260 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 KIR2DL2P43627 348 aaPredicted RBP13.07□□□□□ -0.32
TRIM13-204ENST00000420995 ALKBH2Q6NS38 261 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 DHRS13Q6UX07 377 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 C11orf52Q96A22 123 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 LRFN3Q9BTN0 628 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 SAMD10Q9BYL1 202 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 OPN3Q9H1Y3 402 aaPredicted RBP13.07□□□□□ -0.32
TRIM13-204ENST00000420995 CHODLQ9H9P2 273 aa13.07□□□□□ -0.32
TRIM13-204ENST00000420995 TRGV8A0A0C4DH27 118 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 SP9P0CG40 484 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 CD59P13987 128 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 ZNF25P17030 456 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-204ENST00000420995 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 SLC35B1P78383 322 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 RPEL1Q2QD12 228 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 OR4A47Q6IF82 309 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 TEX43Q6ZNM6 134 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 MOB3BQ86TA1 216 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 DOLPP1Q86YN1 238 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 ST6GALNAC3Q8NDV1 305 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 DDB2Q92466 427 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 V9GYV3 84 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 C9JCJ5 164 aa13.06□□□□□ -0.32
TRIM13-204ENST00000420995 CDX4O14627 284 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-204ENST00000420995 MSMPQ1L6U9 139 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms