RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 OR5H6Q8NGV6 325 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 GPHA2Q96T91 129 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 IGLV11-55A0A075B6I3 123 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 OR11H12B2RN74 326 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 TNFSF12O43508 249 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 FGF2P09038 288 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 CLEC2LP0C7M8 214 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 EDN2P20800 178 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 CBLN1P23435 193 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 TAS2R31P59538 309 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 GUCA2BQ16661 112 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 FAM106AQ4KMX7 169 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 DEFB125Q8N687 156 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 IL17DQ8TAD2 202 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 CXorf58Q96LI9 332 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 SRD5A3Q9H8P0 318 aa13.07□□□□□ -0.32
MSH6-203ENST00000420813 GAR1Q9NY12 217 aaKnown RBP13.07□□□□□ -0.32
MSH6-203ENST00000420813 TRBV7-1A0A0A6YYK4 115 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 TMEM213A2RRL7 107 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 RBMY1BA6NDE4 496 aaKnown RBP13.06□□□□□ -0.32
MSH6-203ENST00000420813 RBMY1EA6NEQ0 496 aaKnown RBP13.06□□□□□ -0.32
MSH6-203ENST00000420813 CGB1A6NKQ9 187 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 HPRT1P00492 218 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 IGHV3-23P01764 117 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 RBMY1DP0C7P1 496 aaKnown RBP13.06□□□□□ -0.32
MSH6-203ENST00000420813 PTHLHP12272 177 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 DEFA4P12838 97 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 CBX5P45973 191 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 OR2B8PP59922 312 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 IDNKQ5T6J7 187 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 SLC16A13Q7RTY0 426 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 TSPAN14Q8NG11 270 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 WDR89Q96FK6 387 aaPredicted RBP13.06□□□□□ -0.32
MSH6-203ENST00000420813 SRSF8Q9BRL6 282 aaKnown RBP13.06□□□□□ -0.32
MSH6-203ENST00000420813 SLC5A7Q9GZV3 580 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 AUNIPQ9H7T9 357 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 RETNQ9HD89 108 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 HRASLSQ9HDD0 168 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 DIABLOQ9NR28 239 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 DNAH1Q9P2D7 4330 aa13.06□□□□□ -0.32
MSH6-203ENST00000420813 A0A087WXM4 84 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 LOC100506127A0A0U1RQW1 187 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 MYOD1P15172 320 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 NQO2P16083 231 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 ZNF57Q68EA5 555 aaPredicted RBP13.05□□□□□ -0.32
MSH6-203ENST00000420813 TMEM61Q8N0U2 210 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 OR5AP2Q8NGF4 316 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 CD300LFQ8TDQ1 290 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 GIMAP1Q8WWP7 306 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 BORCS5Q969J3 196 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 WFDC10AQ9H1F0 79 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 RNF167Q9H6Y7 350 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 S4R3C0 116 aa13.05□□□□□ -0.32
MSH6-203ENST00000420813 IGLC7A0M8Q6 106 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 ZNF320A2RRD8 509 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 SULT1C2O00338 296 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 UPK2O00526 184 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 REG1AP05451 166 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 THOC7Q6I9Y2 204 aaKnown RBP13.04□□□□□ -0.32
MSH6-203ENST00000420813 MARC2Q969Z3 335 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 FAM110AQ9BQ89 295 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 COMMD5Q9GZQ3 224 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 PLEKHA2Q9HB19 425 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 THYN1Q9P016 225 aa13.04□□□□□ -0.32
MSH6-203ENST00000420813 MFSD2BA6NFX1 497 aa13.03□□□□□ -0.32
MSH6-203ENST00000420813 CLEC3BP05452 202 aa13.03□□□□□ -0.32
MSH6-203ENST00000420813 FXYD4P59646 89 aa13.03□□□□□ -0.32
MSH6-203ENST00000420813 ZNF818PQ6ZRF7 136 aa13.03□□□□□ -0.32
MSH6-203ENST00000420813 UXS1Q8NBZ7 420 aa13.03□□□□□ -0.32
MSH6-203ENST00000420813 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
MSH6-203ENST00000420813 COMMD9Q9P000 198 aa13.03□□□□□ -0.32
MSH6-203ENST00000420813 MLXQ9UH92 298 aa13.03□□□□□ -0.32
MSH6-203ENST00000420813 TRAV25A0A0B4J276 109 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 CYB5BO43169 146 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 C8orf88P0DMB2 117 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 ELLP55199 621 aaPredicted RBP13.02□□□□□ -0.33
MSH6-203ENST00000420813 HERV-K104P61576 105 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 ANKRD55Q3KP44 614 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 CROCCP3Q8IVE0 287 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 OR51H1Q8NH63 302 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 ZNF502Q8TBZ5 544 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 QTRT1Q9BXR0 403 aaKnown RBP13.02□□□□□ -0.33
MSH6-203ENST00000420813 TMEM140Q9NV12 185 aa13.02□□□□□ -0.33
MSH6-203ENST00000420813 TRAV3A0A0B4J244 114 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 XRCC3O43542 346 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 JTBO76095 146 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 S1PR2O95136 353 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 PTBP1P26599 531 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSH6-203ENST00000420813 RPL5P46777 297 aaKnown RBP13.01□□□□□ -0.33
MSH6-203ENST00000420813 NEDD8Q15843 81 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 AADACL3Q5VUY0 350 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 HSD17B13Q7Z5P4 300 aaPredicted RBP13.01□□□□□ -0.33
MSH6-203ENST00000420813 TMEM17Q86X19 198 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 DMBX1Q8NFW5 382 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 OR52B4Q8NGK2 314 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 IFT46Q9NQC8 304 aa13.01□□□□□ -0.33
MSH6-203ENST00000420813 MRPL27Q9P0M9 148 aaKnown RBP13.01□□□□□ -0.33
MSH6-203ENST00000420813 FCER2P06734 321 aa13□□□□□ -0.33
MSH6-203ENST00000420813 GNRHRP30968 328 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms