RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OR4C13Q8NGP0 309 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 RITA1Q96K30 269 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 HARBI1Q96MB7 349 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 NKX6-2Q9C056 277 aaPredicted RBP16.93■□□□□ 0.3
GPC1-202ENST00000420138 BET1LQ9NYM9 111 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 ARHGAP32A7KAX9 2087 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 FBN2P35556 2912 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 IGHV2-70DA0A0C4DH43 119 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 ODF3BA8MYP8 253 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 IGLV2-23P01705 113 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 ARG1P05089 322 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 MYOD1P15172 320 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 FHITP49789 147 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 KRTAP10-9P60411 292 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 FAM168AQ92567 244 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 CIB3Q96Q77 187 aaPredicted RBP16.93■□□□□ 0.3
GPC1-202ENST00000420138 TCF19Q9Y242 345 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 KPTNQ9Y664 436 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 IGHV1-3A0A0C4DH29 117 aa16.92■□□□□ 0.3
GPC1-202ENST00000420138 MC5RP33032 325 aa16.92■□□□□ 0.3
GPC1-202ENST00000420138 SNCAP37840 140 aa16.92■□□□□ 0.3
GPC1-202ENST00000420138 SIRPDQ9H106 197 aa16.92■□□□□ 0.3
GPC1-202ENST00000420138 IGHV3-72A0A0B4J1Y9 119 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 IFNA5P01569 189 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 PAX1P15863 534 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 CLEC2AQ6UVW9 174 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 VMO1Q7Z5L0 202 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 FAM213BQ8TBF2 198 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 AIFM2Q9BRQ8 373 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 ASH1LQ9NR48 2969 aaKnown RBP16.91■□□□□ 0.3
GPC1-202ENST00000420138 AMMECR1Q9Y4X0 333 aaPredicted RBP16.91■□□□□ 0.3
GPC1-202ENST00000420138 IGHV4-61A0A0C4DH41 118 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 C15orf62A8K5M9 175 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 NDUFS8O00217 210 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 RAB13P51153 203 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 HSPE1P61604 102 aaKnown RBP16.91■□□□□ 0.3
GPC1-202ENST00000420138 HIST2H2BCQ6DN03 193 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 PIMREGQ9BSJ6 248 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 INSIG2Q9Y5U4 225 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 RFNGQ9Y644 331 aa16.91■□□□□ 0.3
GPC1-202ENST00000420138 SPG11Q96JI7 2443 aa16.9■□□□□ 0.3
GPC1-202ENST00000420138 A0A1W2PPI3 338 aa16.9■□□□□ 0.3
GPC1-202ENST00000420138 FAM157AC9JC47 383 aa16.9■□□□□ 0.3
GPC1-202ENST00000420138 KBTBD11O94819 623 aa16.9■□□□□ 0.3
GPC1-202ENST00000420138 HBG1P69891 147 aa16.9■□□□□ 0.3
GPC1-202ENST00000420138 HBG2P69892 147 aa16.9■□□□□ 0.3
GPC1-202ENST00000420138 GUCA2BQ16661 112 aa16.9■□□□□ 0.3
GPC1-202ENST00000420138 PRNDQ9UKY0 176 aa16.9■□□□□ 0.3
GPC1-202ENST00000420138 RPS16P62249 146 aaKnown RBP16.89■□□□□ 0.29
GPC1-202ENST00000420138 TPTE2P1Q5T6R2 138 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 LFNGQ8NES3 379 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 RPEQ96AT9 228 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 ZNF257Q9Y2Q1 563 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 POLR3KQ9Y2Y1 108 aaPredicted RBP16.89■□□□□ 0.29
GPC1-202ENST00000420138 OR51B2Q9Y5P1 312 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 GCN1Q92616 2671 aaKnown RBP16.89■□□□□ 0.29
GPC1-202ENST00000420138 IGHV4-30-2A0A087WSY4 118 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 DNASE2O00115 360 aaPredicted RBP16.89■□□□□ 0.29
GPC1-202ENST00000420138 SFTA3P0C7M3 94 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 HOXB4P17483 251 aaPredicted RBP16.89■□□□□ 0.29
GPC1-202ENST00000420138 HTR1DP28221 377 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 PEA15Q15121 130 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 MRGPRG-AS1Q2M3A8 158 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 SLC25A24Q6NUK1 477 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 TMEM170AQ8WVE7 144 aa16.89■□□□□ 0.29
GPC1-202ENST00000420138 CENPEQ02224 2701 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 LY86O95711 162 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 RUNX1Q01196 453 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 GUK1Q16774 197 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 OR8G2PQ6IF36 304 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 LHFPL4Q7Z7J7 247 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 TMEM167AQ8TBQ9 72 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 SCGB1C1Q8TD33 95 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 DPM3Q9P2X0 92 aa16.88■□□□□ 0.29
GPC1-202ENST00000420138 TEX50A0A1B0GTY4 177 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 TSPAN4O14817 238 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 FOXH1O75593 365 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 SNAPINO95295 136 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 SLC38A11Q08AI6 406 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 AKR1C8PQ5T2L2 129 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 MOB3BQ86TA1 216 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 THNSL2Q86YJ6 484 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 TBX15Q96SF7 602 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 SCRT1Q9BWW7 348 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 ANKRD17O75179 2603 aaKnown RBP16.87■□□□□ 0.29
GPC1-202ENST00000420138 CSMD2Q7Z408 3487 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 VPS13CQ709C8 3753 aa16.87■□□□□ 0.29
GPC1-202ENST00000420138 C9JQL5 133 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 LGALS7P47929 136 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 DPPA3Q6W0C5 159 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 C17orf50Q8WW18 174 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 RRHO14718 337 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 PRCDQ00LT1 54 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 LILRB2Q8N423 598 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 OR4A5Q8NH83 315 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 CFHR4Q92496 578 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 PBDC1Q9BVG4 233 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 HIPK2Q9H2X6 1198 aa16.86■□□□□ 0.29
GPC1-202ENST00000420138 HEYLQ9NQ87 328 aaPredicted RBP16.86■□□□□ 0.29
GPC1-202ENST00000420138 TPSG1Q9NRR2 321 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms