RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 IGHV1-69-2A0A0G2JMI3 117 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 MAP1LC3B2A6NCE7 125 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 HSPB6O14558 160 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 VENTXO95231 258 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 GOSR1O95249 250 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 COL8A2P25067 703 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 ZNF726P1Q15940 193 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 LRRC75BQ2VPJ9 315 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 BRICD5Q6PL45 260 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 LCN15Q6UWW0 184 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 Q6ZPA2 131 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 MRPL41Q8IXM3 137 aaKnown RBP10.65□□□□□ -0.71
LINC00642-201ENST00000419459 GAPTQ8N292 157 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 GBGT1Q8N5D6 347 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 MAP1LC3BQ9GZQ8 125 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 AKAP9Q99996 3911 aa10.65□□□□□ -0.71
LINC00642-201ENST00000419459 MARCH11A6NNE9 402 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 ZNF737O75373 536 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 LINC00614P0C842 121 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 OR10J1P30954 320 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 ERVK11-1P61568 191 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 RPL23P62829 140 aaKnown RBP10.64□□□□□ -0.71
LINC00642-201ENST00000419459 MZT1Q08AG7 82 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 KCNIP4Q6PIL6 250 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 DEFB108BQ8NET1 73 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 RAB1BQ9H0U4 201 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 RBKSQ9H477 322 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 OR6C3Q9NZP0 311 aa10.64□□□□□ -0.71
LINC00642-201ENST00000419459 SRRM5B3KS81 715 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 OVOL3O00110 214 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 NAPSAO96009 420 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 C20orf204Q6ZNR8 217 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 FAM58AQ8N1B3 248 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 ZNF525Q8N782 197 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 OR2T10Q8NGZ9 312 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 IGFBPL1Q8WX77 278 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 LSM10Q969L4 123 aaKnown RBP10.63□□□□□ -0.71
LINC00642-201ENST00000419459 RSG1Q9BU20 258 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 MANBALQ9NQG1 85 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 FKBP11Q9NYL4 201 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 KIAA1324LA8MWY0 1029 aaPredicted RBP10.63□□□□□ -0.71
LINC00642-201ENST00000419459 OR7C1O76099 320 aaPredicted RBP10.63□□□□□ -0.71
LINC00642-201ENST00000419459 MBP02144 154 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 CD99P14209 185 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 F2RP25116 425 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 PSMB3P49720 205 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 CNN1P51911 297 aaKnown RBP10.63□□□□□ -0.71
LINC00642-201ENST00000419459 FGF12P61328 243 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 HERPUD1Q15011 391 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 SAXO1Q8IYX7 474 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 TMEM106BQ9NUM4 274 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 RNF7Q9UBF6 113 aa10.63□□□□□ -0.71
LINC00642-201ENST00000419459 DOCK11Q5JSL3 2073 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 SETXQ7Z333 2677 aaKnown RBP10.62□□□□□ -0.71
LINC00642-201ENST00000419459 DLEU1O43261 78 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 LHBP01229 141 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 RPLP1P05386 114 aaKnown RBP10.62□□□□□ -0.71
LINC00642-201ENST00000419459 IRF2P14316 349 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 GZMHP20718 246 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 DUX4L9Q6RFH8 374 aaPredicted RBP10.62□□□□□ -0.71
LINC00642-201ENST00000419459 ACP7Q6ZNF0 438 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 FAM90A1Q86YD7 464 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 Q8TCH9 128 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 PERPQ96FX8 193 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 WDR61Q9GZS3 305 aaKnown RBP10.62□□□□□ -0.71
LINC00642-201ENST00000419459 RIMS4Q9H426 269 aaPredicted RBP10.62□□□□□ -0.71
LINC00642-201ENST00000419459 HES4Q9HCC6 221 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 TMEM178BH3BS89 294 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 SYNGR2O43760 224 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 MDKP21741 143 aaPredicted RBP10.62□□□□□ -0.71
LINC00642-201ENST00000419459 LHX4Q969G2 390 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 PCGF1Q9BSM1 259 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 SLC39A9Q9NUM3 307 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 FUT9Q9Y231 359 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 GOLT1BQ9Y3E0 138 aa10.62□□□□□ -0.71
LINC00642-201ENST00000419459 SIRPB1O00241 398 aa10.61□□□□□ -0.71
LINC00642-201ENST00000419459 PGLYRP1O75594 196 aaPredicted RBP10.61□□□□□ -0.71
LINC00642-201ENST00000419459 IGHV4-39P01824 125 aa10.61□□□□□ -0.71
LINC00642-201ENST00000419459 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
LINC00642-201ENST00000419459 RANP62826 216 aaKnown RBP10.61□□□□□ -0.71
LINC00642-201ENST00000419459 TMEM267Q0VDI3 215 aaPredicted RBP10.61□□□□□ -0.71
LINC00642-201ENST00000419459 SMIM21Q3B7S5 101 aa10.61□□□□□ -0.71
LINC00642-201ENST00000419459 TEX38Q6PEX7 206 aa10.61□□□□□ -0.71
LINC00642-201ENST00000419459 RDH5Q92781 318 aa10.61□□□□□ -0.71
LINC00642-201ENST00000419459 ATG101Q9BSB4 218 aa10.61□□□□□ -0.71
LINC00642-201ENST00000419459 VSIRQ9H7M9 311 aa10.61□□□□□ -0.71
LINC00642-201ENST00000419459 NAGKQ9UJ70 344 aa10.61□□□□□ -0.71
LINC00642-201ENST00000419459 ARHGAP32A7KAX9 2087 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 IGKV1D-17A0A075B6S4 117 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 A0A1W2PPQ1 181 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 LRRC30A6NM36 301 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 GYPAP02724 150 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 SERPINE2P07093 398 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 PSG2P11465 335 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 G0S2P27469 103 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 CFHR2P36980 270 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 FGF8P55075 233 aaPredicted RBP10.6□□□□□ -0.71
LINC00642-201ENST00000419459 SSX7Q7RTT5 188 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 Q8IYB0 196 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms