RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MORN2Q502X0 79 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 Q6ZT83 130 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 TMEM178AQ8NBL3 297 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 OR4P4Q8NGL7 312 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 RAB1CQ92928 201 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 GFRA3O60609 400 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 TCF19Q9Y242 345 aa12.56□□□□□ -0.4
SEMA3B-203ENST00000419007 ZNF134P52741 427 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 BAGE3Q86Y29 109 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 PRR7Q8TB68 274 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 IL6RP08887 468 aaPredicted RBP12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 GCHFRP30047 84 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 IER3P46695 156 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 OR5I1Q13606 314 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 UTF1Q5T230 341 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 PLCE1Q9P212 2302 aa12.55□□□□□ -0.4
SEMA3B-203ENST00000419007 MYOD1P15172 320 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 CRISP2P16562 243 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 ERVFC1-1P60608 527 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 NUTF2P61970 127 aaKnown RBP12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 CYB5R2Q6BCY4 276 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 STPG3Q8N7X2 389 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 NPVFQ9HCQ7 196 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 FCN1O00602 326 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 FRMD6-AS1P0C7T7 363 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 OR10J1P30954 320 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 HTD2P86397 168 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 EFNB3Q15768 340 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 VHLLQ6RSH7 139 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 FAM122AQ96E09 287 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 SAMD10Q9BYL1 202 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 MRPL18Q9H0U6 180 aaKnown RBP12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 ENY2Q9NPA8 101 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 VDAC2P45880 294 aaPredicted RBP12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 SLC35B1P78383 322 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 RELBQ01201 579 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 ZNF124Q15973 351 aa12.54□□□□□ -0.4
SEMA3B-203ENST00000419007 M0R143 59 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 CCL11P51671 97 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 OR1L6Q8NGR2 347 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 HSPB9Q9BQS6 159 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 CACNA1GO43497 2377 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 IGKV1D-17A0A075B6S4 117 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 A8MXE2 369 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 K7EN84 100 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 SERF1AO75920 110 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 CGAP01215 116 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 NPY1RP25929 384 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 RAB4BP61018 213 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 RHOBP62745 196 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 ARSJQ5FYB0 599 aaPredicted RBP12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 FAM201AQ5SY85 155 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 UHRF2Q96PU4 802 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 FAM103A1Q9BTL3 118 aaKnown RBP12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 PAM16Q9Y3D7 125 aa12.53□□□□□ -0.4
SEMA3B-203ENST00000419007 ARFGEF3Q5TH69 2177 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 IGKV3-15P01624 115 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 CASP6P55212 293 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 RAB31Q13636 194 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 TDRG1Q3Y452 100 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 C1orf194Q5T5A4 169 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 ZCCHC14Q8WYQ9 949 aaKnown RBP12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 LRFN3Q9BTN0 628 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 GCM1Q9NP62 436 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 PARD6AQ9NPB6 346 aa12.52□□□□□ -0.4
SEMA3B-203ENST00000419007 YLPM1P49750 1951 aaKnown RBP12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 SNURFLB1AK76 121 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 IGFBP2P18065 325 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 TPPP2P59282 170 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 HES3Q5TGS1 186 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 SLC24A4Q8NFF2 622 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 F2Z2F3 143 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 CDX4O14627 284 aaPredicted RBP12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 BATFQ16520 125 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 OR8I2Q8N0Y5 310 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 C9orf106Q8NAJ2 232 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 VN1R17PQ8TDU5 208 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 FAM216AQ8WUB2 273 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 CLCF1Q9UBD9 225 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 JPT1Q9UK76 154 aa12.52□□□□□ -0.41
SEMA3B-203ENST00000419007 ZNF891A8MT65 544 aaPredicted RBP12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 CA2P00918 260 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 KIR2DL2P43627 348 aaPredicted RBP12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 TCL1AP56279 114 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 PSG5Q15238 335 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 KRTCAP3Q53RY4 240 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 TRAT1Q6PIZ9 186 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 C1orf229Q6ZS94 237 aaPredicted RBP12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 MIR17HGQ75NE6 70 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 TMEM106BQ9NUM4 274 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 IL36BQ9NZH7 164 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 MT-CO2P00403 227 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 GATA2P23769 480 aaPredicted RBP12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 Q6ZWC4 215 aa12.51□□□□□ -0.41
SEMA3B-203ENST00000419007 MOGAT3Q86VF5 341 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms