RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TMEM140Q9NV12 185 aa15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 LSM4Q9Y4Z0 139 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-202ENST00000418336 ANKRD34BA5PLL1 514 aa15.78■□□□□ 0.12
PKNOX1-202ENST00000418336 IGKV1-39P01597 117 aa15.78■□□□□ 0.12
PKNOX1-202ENST00000418336 IGKV1D-39P04432 117 aa15.78■□□□□ 0.12
PKNOX1-202ENST00000418336 RHOGP84095 191 aa15.78■□□□□ 0.12
PKNOX1-202ENST00000418336 SOSTQ9BQB4 213 aa15.78■□□□□ 0.12
PKNOX1-202ENST00000418336 RANGRFQ9HD47 186 aaPredicted RBP15.78■□□□□ 0.12
PKNOX1-202ENST00000418336 ZNF257Q9Y2Q1 563 aa15.78■□□□□ 0.12
PKNOX1-202ENST00000418336 IGLC7A0M8Q6 106 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 FAM223BA6NKX1 122 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 MARCH11A6NNE9 402 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 ACTL6BO94805 426 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 PSMB6P28072 239 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 LPAR6P43657 344 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 PHLDA2Q53GA4 152 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 ZNF429Q86V71 674 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 FAM223AQ8IWN6 122 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 PRR25Q96S07 402 aa15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 RBM38Q9H0Z9 239 aaKnown RBP15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 FAM212BQ9NTI7 297 aaPredicted RBP15.77■□□□□ 0.12
PKNOX1-202ENST00000418336 GABARAPH6UMI1 98 aa15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 BMPR1BO00238 502 aa15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 CTDSPLO15194 276 aa15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 MPPED1O15442 326 aa15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 PTBP1P26599 531 aaKnown RBP eCLIP15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 TSPAN5P62079 268 aa15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 TBC1D26Q86UD7 250 aa15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 TMEM229BQ8NBD8 167 aa15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 FYTTD1Q96QD9 318 aaKnown RBP15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 AIFM2Q9BRQ8 373 aa15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 PEF1Q9UBV8 284 aaKnown RBP15.76■□□□□ 0.11
PKNOX1-202ENST00000418336 SORL1Q92673 2214 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 RPA2P15927 270 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 TBPP20226 339 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 ECI1P42126 302 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 RND3P61587 244 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 SLC25A42Q86VD7 318 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 CMTM1Q8IZ96 169 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 SLC38A6Q8IZM9 456 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 ARRDC1Q8N5I2 433 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 NECAP1Q8NC96 275 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 SMIM4Q8WVI0 70 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 HRASLSQ9HDD0 168 aa15.75■□□□□ 0.11
PKNOX1-202ENST00000418336 IGLV11-55A0A075B6I3 123 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 DBX1A6NMT0 343 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 RGS5O15539 181 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 SAP30O75446 220 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 OR2J3O76001 311 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 NDUFB8O95169 186 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 REG1AP05451 166 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 G6PCP35575 357 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 EXOSC2Q13868 293 aaKnown RBP15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 LPCAT3Q6P1A2 487 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 C15orf40Q8WUR7 153 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 SEC22AQ96IW7 307 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 CCDC140Q96MF4 163 aa15.74■□□□□ 0.11
PKNOX1-202ENST00000418336 TEX50A0A1B0GTY4 177 aa15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 ZP3P21754 424 aa15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 MRPS10P82664 201 aaKnown RBP15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 SSBP1Q04837 148 aaKnown RBP15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 WT1-ASQ06250 92 aa15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 C15orf32Q32M92 178 aa15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 RNASE10Q5GAN6 216 aaKnown RBP15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 HAPLN4Q86UW8 402 aa15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 OR10W1Q8NGF6 305 aa15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 SRSF8Q9BRL6 282 aaKnown RBP15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 NDUFA4L2Q9NRX3 87 aa15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 ZMAT5Q9UDW3 170 aaKnown RBP15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 ZNF256Q9Y2P7 627 aaPredicted RBP15.73■□□□□ 0.11
PKNOX1-202ENST00000418336 KRASP01116 189 aa15.72■□□□□ 0.11
PKNOX1-202ENST00000418336 IGLV1-51P01701 117 aa15.72■□□□□ 0.11
PKNOX1-202ENST00000418336 SPNP16150 400 aa15.72■□□□□ 0.11
PKNOX1-202ENST00000418336 PI3P19957 117 aa15.72■□□□□ 0.11
PKNOX1-202ENST00000418336 ATP5G2Q06055 141 aa15.72■□□□□ 0.11
PKNOX1-202ENST00000418336 FAAP20Q6NZ36 180 aa15.72■□□□□ 0.11
PKNOX1-202ENST00000418336 DMBX1Q8NFW5 382 aa15.72■□□□□ 0.11
PKNOX1-202ENST00000418336 NSG2Q9Y328 171 aa15.72■□□□□ 0.11
PKNOX1-202ENST00000418336 GSTZ1O43708 216 aaPredicted RBP15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 P0C879 139 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 MECP2P51608 486 aaKnown RBP15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 SYNJ2BPP57105 145 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 TAS2R19P59542 299 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 DEFB121Q5J5C9 76 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 STEAP1BQ6NZ63 245 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 ADAMTSL5Q6ZMM2 481 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 OR9G4Q8NGQ1 327 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 ZNF486Q96H40 463 aaPredicted RBP15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 DIRAS2Q96HU8 199 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 B9D2Q9BPU9 175 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 TMEM14BQ9NUH8 114 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 FBXL7Q9UJT9 491 aa15.71■□□□□ 0.11
PKNOX1-202ENST00000418336 CSN3P07498 182 aa15.7■□□□□ 0.1
PKNOX1-202ENST00000418336 TNFSF8P32971 234 aa15.7■□□□□ 0.1
PKNOX1-202ENST00000418336 MFAP2P55001 183 aa15.7■□□□□ 0.1
PKNOX1-202ENST00000418336 TERB2Q8NHR7 220 aa15.7■□□□□ 0.1
PKNOX1-202ENST00000418336 TP53RKQ96S44 253 aa15.7■□□□□ 0.1
PKNOX1-202ENST00000418336 QTRT1Q9BXR0 403 aaKnown RBP15.7■□□□□ 0.1
PKNOX1-202ENST00000418336 C6orf62Q9GZU0 229 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms