RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 GPR132Q9UNW8 380 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 WNK1Q9H4A3 2382 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 VWFP04275 2813 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 TEX13DA0A0J9YY54 714 aaPredicted RBP9.72□□□□□ -0.85
SKA1-203ENST00000417656 A0A1B0GW64 132 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 HMX3A6NHT5 357 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 TEX22C9J3V5 150 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 E7EUB6 86 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 SERPINE2P07093 398 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 IL6RP08887 468 aaPredicted RBP9.72□□□□□ -0.85
SKA1-203ENST00000417656 OR5AC1P0C628 307 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 OR9G9P0C7N8 305 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 MAS1LP35410 378 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 OR2B8PP59922 312 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 DEFA5Q01523 94 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 TRIM16LQ309B1 348 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 DEFB136Q30KP8 78 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 ETV3LQ6ZN32 361 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 ZNF695Q8IW36 515 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 ADAD2Q8NCV1 583 aaKnown RBP9.72□□□□□ -0.85
SKA1-203ENST00000417656 DEDD2Q8WXF8 326 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 TMEM230Q96A57 120 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 MS4A10Q96PG2 267 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 SPIN2AQ99865 258 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 SPIN2BQ9BPZ2 258 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 NAA60Q9H7X0 242 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 GNB4Q9HAV0 340 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 NSG2Q9Y328 171 aa9.72□□□□□ -0.85
SKA1-203ENST00000417656 CRYM-AS1A6NIL9 109 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 CGB1A6NKQ9 187 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 PF4P02776 101 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 UCP1P25874 307 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 RAB9AP51151 201 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 TPPP2P59282 170 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 KIAA0141Q14154 515 aaPredicted RBP9.71□□□□□ -0.86
SKA1-203ENST00000417656 LINC00299Q6ZSB3 139 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 SEC22AQ96IW7 307 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 TMEM68Q96MH6 324 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 SCGB3A2Q96PL1 93 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 DUX3Q96PT4 197 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 OR5B12Q96R08 314 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 ZNF355PQ9NSJ1 428 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 COA4Q9NYJ1 87 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 TRRAPQ9Y4A5 3859 aa9.71□□□□□ -0.86
SKA1-203ENST00000417656 IGKV1-5P01602 117 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 TRGV3P03979 118 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 AREGP15514 252 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 CDX1P47902 265 aaPredicted RBP9.7□□□□□ -0.86
SKA1-203ENST00000417656 CCR6P51684 374 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 AKR1C2P52895 323 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 IZUMO4Q1ZYL8 232 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 C19orf35Q6ZS72 473 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 TMED4Q7Z7H5 227 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 ZNF491Q8N8L2 437 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 LHFPL5Q8TAF8 219 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 S100ZQ8WXG8 99 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 COMMD5Q9GZQ3 224 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 TMEM222Q9H0R3 208 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 PRR13Q9NZ81 148 aa9.7□□□□□ -0.86
SKA1-203ENST00000417656 A0A0G2JRQ6 117 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 NAP1L6A6NFF2 107 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 DBX1A6NMT0 343 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 C15orf61A6NNL5 157 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 H3BUA1 57 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 B3GALNT1O75752 331 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 SNAPC5O75971 98 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 IGHV3-11P01762 117 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 PRH1P02810 166 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 REG1AP05451 166 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 FGF2P09038 288 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 AKR1C4P17516 323 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 CD40LGP29965 261 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 SLC6A1P30531 599 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 BTCP35070 178 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 H2BFWTQ7Z2G1 175 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 SGPP2Q8IWX5 399 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 RNASE11Q8TAA1 199 aaKnown RBP9.69□□□□□ -0.86
SKA1-203ENST00000417656 PKD1L1Q8TDX9 2849 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 RAX2Q96IS3 184 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 UBE2E2Q96LR5 201 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 CCDC32Q9BV29 185 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 ALX4Q9H161 411 aaPredicted RBP9.69□□□□□ -0.86
SKA1-203ENST00000417656 SLA2Q9H6Q3 261 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
SKA1-203ENST00000417656 IGLC7A0M8Q6 106 aa9.68□□□□□ -0.86
SKA1-203ENST00000417656 NPIPB5A8MRT5 1133 aa9.68□□□□□ -0.86
SKA1-203ENST00000417656 J3QL48 77 aa9.68□□□□□ -0.86
SKA1-203ENST00000417656 RBMXL2O75526 392 aaKnown RBP9.68□□□□□ -0.86
SKA1-203ENST00000417656 LGALS1P09382 135 aaKnown RBP9.68□□□□□ -0.86
SKA1-203ENST00000417656 P0C879 139 aa9.68□□□□□ -0.86
SKA1-203ENST00000417656 SUPT4H1P63272 117 aaKnown RBP9.68□□□□□ -0.86
SKA1-203ENST00000417656 RBMS2Q15434 407 aaKnown RBP9.68□□□□□ -0.86
SKA1-203ENST00000417656 CADM3Q8N126 398 aa9.68□□□□□ -0.86
SKA1-203ENST00000417656 TTC9CQ8N5M4 171 aa9.68□□□□□ -0.86
SKA1-203ENST00000417656 GLYATL2Q8WU03 294 aa9.68□□□□□ -0.86
SKA1-203ENST00000417656 TSC22D3Q99576 134 aa9.68□□□□□ -0.86
SKA1-203ENST00000417656 SLC25A21Q9BQT8 299 aaPredicted RBP9.68□□□□□ -0.86
SKA1-203ENST00000417656 C7orf50Q9BRJ6 194 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms