RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 SLC2A8Q9NY64 477 aa13.95□□□□□ -0.18
VPS16-204ENST00000417508 A0A087WXM4 84 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 C2orf70A6NJV1 201 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 ZNF785A8K8V0 405 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 PPP5D1E7EU14 171 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 UPK2O00526 184 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 IFNA6P05013 189 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 FOLR2P14207 255 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 GNRHRP30968 328 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 ARL3P36405 182 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 OR2B8PP59922 312 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 THOC7Q6I9Y2 204 aaKnown RBP13.94□□□□□ -0.18
VPS16-204ENST00000417508 CADM3Q8N126 398 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 COMMD5Q9GZQ3 224 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 THYN1Q9P016 225 aa13.94□□□□□ -0.18
VPS16-204ENST00000417508 IGLV11-55A0A075B6I3 123 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 CYB5BO43169 146 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 TPPPO94811 219 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 NAT1P18440 290 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 TAS2R46P59540 309 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 TMEM69Q5SWH9 247 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 CLEC19AQ6UXS0 136 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 HSD17B13Q7Z5P4 300 aaPredicted RBP13.93□□□□□ -0.18
VPS16-204ENST00000417508 ISOC1Q96CN7 298 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 YIPF6Q96EC8 236 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 PALMDQ9NP74 551 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 ZC4H2Q9NQZ6 224 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 EHFQ9NZC4 300 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 COMMD9Q9P000 198 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 ANAPC10Q9UM13 185 aa13.93□□□□□ -0.18
VPS16-204ENST00000417508 CGB1A6NKQ9 187 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 FCER2P06734 321 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 CBLN1P23435 193 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 PRSS3P35030 304 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 CD81P60033 236 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 AADACL3Q5VUY0 350 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 LINC00322Q6ZN03 302 aaPredicted RBP13.92□□□□□ -0.18
VPS16-204ENST00000417508 TMEM17Q86X19 198 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 SAMD12Q8N8I0 201 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 DMBX1Q8NFW5 382 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 TSPAN14Q8NG11 270 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 OR51H1Q8NH63 302 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 MOB3AQ96BX8 217 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 CCDC140Q96MF4 163 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 CMTM3Q96MX0 182 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 NEURL2Q9BR09 285 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 EDA2RQ9HAV5 297 aa13.92□□□□□ -0.18
VPS16-204ENST00000417508 HUWE1Q7Z6Z7 4374 aaKnown RBP13.92□□□□□ -0.18
VPS16-204ENST00000417508 MEIS3P1A6NDR6 274 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 PGLYRP1O75594 196 aaPredicted RBP13.91□□□□□ -0.18
VPS16-204ENST00000417508 TNFAIP8O95379 198 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 HLA-AP01891 365 aaKnown RBP13.91□□□□□ -0.18
VPS16-204ENST00000417508 CLEC3BP05452 202 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 F2RP25116 425 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 RFX2P48378 723 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 TAS2R20P59543 309 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 ERVK-16P61578 105 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 C19orf35Q6ZS72 473 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 CMTM1Q8IZ96 169 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 OR5H2Q8NGV7 314 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 ZNF2Q9BSG1 426 aaPredicted RBP13.91□□□□□ -0.18
VPS16-204ENST00000417508 QTRT1Q9BXR0 403 aaKnown RBP13.91□□□□□ -0.18
VPS16-204ENST00000417508 TMEM140Q9NV12 185 aa13.91□□□□□ -0.18
VPS16-204ENST00000417508 IGLC7A0M8Q6 106 aa13.9□□□□□ -0.18
VPS16-204ENST00000417508 A8MWP6 167 aa13.9□□□□□ -0.18
VPS16-204ENST00000417508 IGHV3-23P01764 117 aa13.9□□□□□ -0.18
VPS16-204ENST00000417508 MYOD1P15172 320 aa13.9□□□□□ -0.18
VPS16-204ENST00000417508 PTBP1P26599 531 aaKnown RBP eCLIP13.9□□□□□ -0.18
VPS16-204ENST00000417508 TGFBR1P36897 503 aa13.9□□□□□ -0.18
VPS16-204ENST00000417508 LPCAT3Q6P1A2 487 aa13.9□□□□□ -0.18
VPS16-204ENST00000417508 OR6F1Q8NGZ6 308 aa13.9□□□□□ -0.18
VPS16-204ENST00000417508 CEPT1Q9Y6K0 416 aa13.9□□□□□ -0.18
VPS16-204ENST00000417508 TRAV3A0A0B4J244 114 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 SMIM31A0A1B0GVY4 71 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 ZNF320A2RRD8 509 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 S1PR2O95136 353 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 REG1AP05451 166 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 TRAPPC2P0DI81 140 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 TRAPPC2BP0DI82 140 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 LSM3P62310 102 aaKnown RBP13.89□□□□□ -0.19
VPS16-204ENST00000417508 GUCA2BQ16661 112 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 ZNF57Q68EA5 555 aaPredicted RBP13.89□□□□□ -0.19
VPS16-204ENST00000417508 OR1L8Q8NGR8 309 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 ZNF502Q8TBZ5 544 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 VN1R17PQ8TDU5 208 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 MARC2Q969Z3 335 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 SLC25A46Q96AG3 418 aa13.89□□□□□ -0.19
VPS16-204ENST00000417508 DGCR14Q96DF8 476 aaKnown RBP13.89□□□□□ -0.19
VPS16-204ENST00000417508 MARCH11A6NNE9 402 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 OR11H12B2RN74 326 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 GPR31O00270 319 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 PMP2P02689 132 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 CD7P09564 240 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 S100GP29377 79 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 ELLP55199 621 aaPredicted RBP13.88□□□□□ -0.19
VPS16-204ENST00000417508 ANKRD55Q3KP44 614 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 SLC16A13Q7RTY0 426 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 LYSMD2Q8IV50 215 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 ATP6V0BQ99437 205 aa13.88□□□□□ -0.19
VPS16-204ENST00000417508 PLEKHA3Q9HB20 300 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms