RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 CLDN14O95500 239 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 CRYGCP07315 174 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 STAG3L2P0CL84 134 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 MGST1P10620 155 aaKnown RBP5.32□□□□□ -1.56
CCNT1-202ENST00000417344 GNG4P50150 75 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 RPL8P62917 257 aaKnown RBP5.32□□□□□ -1.56
CCNT1-202ENST00000417344 C17orf67Q0P5P2 114 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 PLCXD2Q0VAA5 305 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 FXYD3Q14802 87 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 KIR3DS1Q14943 382 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 CEACAM21Q3KPI0 293 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 RASL11AQ6T310 242 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 FOXI2Q6ZQN5 318 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 TMEM251Q8N6I4 163 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 Q8N7P7 452 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 WIPF2Q8TF74 440 aaPredicted RBP5.32□□□□□ -1.56
CCNT1-202ENST00000417344 SPSB4Q96A44 273 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 CLDN23Q96B33 292 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 MBD6Q96DN6 1003 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 MSRB2Q9Y3D2 182 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 OR2W1Q9Y3N9 320 aa5.32□□□□□ -1.56
CCNT1-202ENST00000417344 SHANK1Q9Y566 2161 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 PRSS38A1L453 326 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 OR11H12B2RN74 326 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 H3BMH7 237 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 KLRC4-KLRK1H3BQV0 150 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 M0R135 149 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 ISLRO14498 428 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 RRHO14718 337 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 CCL16O15467 120 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 LEPROTL1O95214 131 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 CA3P07451 260 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 SP9P0CG40 484 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 FABP2P12104 132 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 IGFBP2P18065 325 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 CEBPDP49716 269 aaPredicted RBP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 EDDM3BP56851 147 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 FOXE3Q13461 319 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 DAZAP2Q15038 168 aaPredicted RBP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 CENPWQ5EE01 88 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 FAM162BQ5T6X4 162 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 C6orf15Q6UXA7 325 aaPredicted RBP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 DOLPP1Q86YN1 238 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 TPRX1Q8N7U7 411 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 GJC3Q8NFK1 279 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 TSTD1Q8NFU3 115 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 OR11H1Q8NG94 326 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 OR11H2Q8NH07 326 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 ZNF799Q96GE5 643 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 TAAR6Q96RI8 345 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 ATP23Q9Y6H3 246 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 IGHV1-24A0A0C4DH33 117 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 H3BML4 177 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 SNAI2O43623 268 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 RBMXL2O75526 392 aaKnown RBP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 HNRNPA1P09651 372 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 SPINK2P20155 84 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 RPS16P62249 146 aaKnown RBP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 RSPO1Q2MKA7 263 aaPredicted RBP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 ZNF585BQ52M93 769 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 TMEM177Q53S58 311 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 PCSK4Q6UW60 755 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 FOXL2NBQ6ZUU3 175 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 CCL4L1Q8NHW4 92 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 RLN3Q8WXF3 142 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 URB1-AS1Q96HZ7 61 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 MRPL16Q9NX20 251 aaKnown RBP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 SS18L2Q9UHA2 77 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 BOKQ9UMX3 212 aaPredicted RBP5.31□□□□□ -1.56
CCNT1-202ENST00000417344 ZNF257Q9Y2Q1 563 aa5.31□□□□□ -1.56
CCNT1-202ENST00000417344 ATG2BQ96BY7 2078 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 DNAH14Q0VDD8 3507 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 HELTA6NFD8 242 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 SH2D7A6NKC9 451 aaPredicted RBP5.3□□□□□ -1.56
CCNT1-202ENST00000417344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.3□□□□□ -1.56
CCNT1-202ENST00000417344 TNFSF11O14788 317 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 IGKV3-11P04433 115 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 IBA57Q5T440 356 aaKnown RBP5.3□□□□□ -1.56
CCNT1-202ENST00000417344 HLA-DQA1Q5Y7H0 255 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 ADAMTSL5Q6ZMM2 481 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 PQLC2Q6ZP29 291 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 LINC00173Q6ZV60 143 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 SFTPA1Q8IWL2 248 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 FGFRL1Q8N441 504 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 STPG3Q8N7X2 389 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 ST8SIA1Q92185 356 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 H1FXQ92522 213 aaKnown RBP5.3□□□□□ -1.56
CCNT1-202ENST00000417344 RAB37Q96AX2 223 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 C5orf30Q96GV9 206 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 MAP1LC3CQ9BXW4 147 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 SERTAD4Q9NUC0 356 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 LIN7CQ9NUP9 197 aaKnown RBP5.3□□□□□ -1.56
CCNT1-202ENST00000417344 HRASLS2Q9NWW9 162 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 MTCH1Q9NZJ7 389 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 JPT1Q9UK76 154 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 KCNS2Q9ULS6 477 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 WDR83OSQ9Y284 106 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 HILPDAQ9Y5L2 63 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 U3KQE9 123 aa5.3□□□□□ -1.56
CCNT1-202ENST00000417344 FAM90A10PA6NDY2 464 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms