RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 OR2A7Q96R45 310 aa6.38□□□□□ -1.39
MDC1-203ENST00000417033 RNF5Q99942 180 aa6.38□□□□□ -1.39
MDC1-203ENST00000417033 FAM103A1Q9BTL3 118 aaKnown RBP6.38□□□□□ -1.39
MDC1-203ENST00000417033 QTRT1Q9BXR0 403 aaKnown RBP6.38□□□□□ -1.39
MDC1-203ENST00000417033 RANBP3Q9H6Z4 567 aaPredicted RBP6.38□□□□□ -1.39
MDC1-203ENST00000417033 ZNF702PQ9H963 129 aa6.38□□□□□ -1.39
MDC1-203ENST00000417033 GPN1Q9HCN4 374 aaPredicted RBP6.38□□□□□ -1.39
MDC1-203ENST00000417033 BET1LQ9NYM9 111 aa6.38□□□□□ -1.39
MDC1-203ENST00000417033 KIAA1456Q9P272 454 aa6.38□□□□□ -1.39
MDC1-203ENST00000417033 SHPKQ9UHJ6 478 aa6.38□□□□□ -1.39
MDC1-203ENST00000417033 PITPNC1Q9UKF7 332 aa6.38□□□□□ -1.39
MDC1-203ENST00000417033 MMP24Q9Y5R2 645 aa6.38□□□□□ -1.39
MDC1-203ENST00000417033 CLDN34H7C241 214 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 FGF16O43320 207 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 TCF21O43680 179 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 FBXO24O75426 580 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 APELAP0DMC3 54 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 EGR2P11161 476 aaPredicted RBP6.37□□□□□ -1.39
MDC1-203ENST00000417033 CXCL3P19876 107 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 VDAC1P21796 283 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 CX3CL1P78423 397 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 SRPXP78539 464 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 SCGB2A2Q13296 93 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 TNXAQ16473 311 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 HIST2H2BDQ6DRA6 164 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 C19orf35Q6ZS72 473 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 Q6ZSV7 163 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 PPP1R27Q86WC6 154 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 TEX45Q8NA69 505 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 OR11H7Q8NGC8 314 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 OR8H1Q8NGG4 311 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 GRPEL2Q8TAA5 225 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 LSM10Q969L4 123 aaKnown RBP6.37□□□□□ -1.39
MDC1-203ENST00000417033 PHB2Q99623 299 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 RASL11BQ9BPW5 248 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 C1RLQ9NZP8 487 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 MGAT4CQ9UBM8 478 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 LINC00527Q9UJ94 153 aa6.37□□□□□ -1.39
MDC1-203ENST00000417033 TET2Q6N021 2002 aaPredicted RBP6.37□□□□□ -1.39
MDC1-203ENST00000417033 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 C13orf42A0A1B0GVH6 325 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 HMX3A6NHT5 357 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 C15orf61A6NNL5 157 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 FAM25EA8MYX2 175 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 ATP6V0E1O15342 81 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 ST8SIA3O43173 380 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 SSNA1O43805 119 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 HLA-DRB1P01911 266 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 HLA-GP17693 338 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 RPL8P62917 257 aaKnown RBP6.36□□□□□ -1.39
MDC1-203ENST00000417033 FXYD3Q14802 87 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 CXorf66Q5JRM2 361 aaPredicted RBP6.36□□□□□ -1.39
MDC1-203ENST00000417033 ASPHD1Q5U4P2 390 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 C10orf99Q6UWK7 81 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 C16orf82Q7Z2V1 217 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 CADM3Q8N126 398 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.36□□□□□ -1.39
MDC1-203ENST00000417033 RRNAD1Q96FB5 475 aaKnown RBP6.36□□□□□ -1.39
MDC1-203ENST00000417033 NOL4LQ96MY1 436 aaPredicted RBP6.36□□□□□ -1.39
MDC1-203ENST00000417033 PARP11Q9NR21 331 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 TMEM14BQ9NUH8 114 aa6.36□□□□□ -1.39
MDC1-203ENST00000417033 TEX50A0A1B0GTY4 177 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 DUXBA0A1W2PPF3 345 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 C5orf51A6NDU8 294 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 TEX22C9J3V5 150 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 G3V318 75 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 TRIM77I1YAP6 450 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 PITX3O75364 302 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 REG1AP05451 166 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 SULT1A3P0DMM9 295 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 SULT1A4P0DMN0 295 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 AREGP15514 252 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 RPL27AP46776 148 aaKnown RBP6.35□□□□□ -1.39
MDC1-203ENST00000417033 COMPP49747 757 aaPredicted RBP6.35□□□□□ -1.39
MDC1-203ENST00000417033 H2BFSP57053 126 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 RRAS2P62070 204 aaPredicted RBP6.35□□□□□ -1.39
MDC1-203ENST00000417033 DEFA5Q01523 94 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 SMCO1Q147U7 214 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 ECSCRQ19T08 205 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 IAH1Q2TAA2 248 aaPredicted RBP6.35□□□□□ -1.39
MDC1-203ENST00000417033 SLC35E3Q7Z769 313 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 FOXRED2Q8IWF2 684 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 MMD2Q8IY49 270 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 ZBTB8BQ8NAP8 495 aaPredicted RBP6.35□□□□□ -1.39
MDC1-203ENST00000417033 OR10W1Q8NGF6 305 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 OR4D5Q8NGN0 318 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 OR5M8Q8NGP6 311 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 OR4A16Q8NH70 328 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 OR4A5Q8NH83 315 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 OR1S1Q8NH92 325 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 VSTM2AQ8TAG5 236 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 ABHD5Q8WTS1 349 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 CHAC2Q8WUX2 184 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 SRSF12Q8WXF0 261 aaKnown RBP6.35□□□□□ -1.39
MDC1-203ENST00000417033 ARPC1AQ92747 370 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 FYTTD1Q96QD9 318 aaKnown RBP6.35□□□□□ -1.39
MDC1-203ENST00000417033 JMJD8Q96S16 334 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 HINT2Q9BX68 163 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 NPFFR1Q9GZQ6 430 aa6.35□□□□□ -1.39
MDC1-203ENST00000417033 MAGT1Q9H0U3 335 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms