RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 TCTEX1D1Q8N7M0 179 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 CCDC71LQ8N9Z2 235 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 ZNF383Q8NA42 475 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 ENKURQ8TC29 256 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 DDB2Q92466 427 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 SLC2A9Q9NRM0 540 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 KIAA1456Q9P272 454 aa9.92□□□□□ -0.82
LINC00339-202ENST00000416769 PLECQ15149 4684 aaKnown RBP9.92□□□□□ -0.82
LINC00339-202ENST00000416769 LINC00473A8K010 186 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 TNFSF12O43508 249 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 IGHV4-30-4P0DP06 118 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 PI3P19957 117 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 INSL3P51460 131 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
LINC00339-202ENST00000416769 DHODHQ02127 395 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 TMEM65Q6PI78 240 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 GLDNQ6ZMI3 551 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-202ENST00000416769 KCTD9Q7L273 389 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 NRARPQ7Z6K4 114 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 ZNF429Q86V71 674 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 Q8N1Y9 231 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 DRAXINQ8NBI3 349 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-202ENST00000416769 MINDY2Q8NBR6 621 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 OR8H1Q8NGG4 311 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 TM2D3Q9BRN9 247 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 FAM212BQ9NTI7 297 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-202ENST00000416769 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 PRELID3BQ9Y3B1 194 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 NUBP2Q9Y5Y2 271 aa9.91□□□□□ -0.82
LINC00339-202ENST00000416769 A0A1W2PN81 502 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 H0YJW9 148 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 FCN1O00602 326 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 B3GALNT1O75752 331 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 PTTG1O95997 202 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 HLA-DRB1P01911 266 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 APOA2P02652 100 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 RLN1P04808 185 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 EGR2P11161 476 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-202ENST00000416769 F2RP25116 425 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 CHRNA7P36544 502 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 KIR2DS2P43631 304 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 MECP2P51608 486 aaKnown RBP9.9□□□□□ -0.82
LINC00339-202ENST00000416769 LINC00205P59089 165 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 TAS2R31P59538 309 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 UBE2MP61081 183 aaKnown RBP9.9□□□□□ -0.82
LINC00339-202ENST00000416769 C5orf64Q2M2E5 130 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 TMEM128Q5BJH2 165 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 ACSM6Q6P461 480 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 TBC1D26Q86UD7 250 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 SLC25A42Q86VD7 318 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 CENPSQ8N2Z9 138 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 ADAD2Q8NCV1 583 aaKnown RBP9.9□□□□□ -0.82
LINC00339-202ENST00000416769 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 RNF5Q99942 180 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 FAM103A1Q9BTL3 118 aaKnown RBP9.9□□□□□ -0.82
LINC00339-202ENST00000416769 FBXL15Q9H469 300 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 RETNQ9HD89 108 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 SLC35D1Q9NTN3 355 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 FLVCR2Q9UPI3 526 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 KCNIP3Q9Y2W7 256 aa9.9□□□□□ -0.82
LINC00339-202ENST00000416769 TEX13DA0A0J9YY54 714 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-202ENST00000416769 CRYM-AS1A6NIL9 109 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 LINC01619G3V211 115 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 ARPC1BO15143 372 aaKnown RBP9.89□□□□□ -0.83
LINC00339-202ENST00000416769 NBR2O15453 112 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 RBFOX2O43251 390 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC00339-202ENST00000416769 H2AFB2P0C5Z0 115 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 AKR1C4P17516 323 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 DEFA5Q01523 94 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 RTL8BQ17RB0 113 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 RGS21Q2M5E4 152 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 PLET1Q6UQ28 207 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 TMED4Q7Z7H5 227 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 PDPNQ86YL7 162 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 SGPP2Q8IWX5 399 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 CD300LFQ8TDQ1 290 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 TMEM230Q96A57 120 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 GALNT14Q96FL9 552 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 MS4A10Q96PG2 267 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 GPHA2Q96T91 129 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 KRTAP17-1Q9BYP8 105 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 C20orf85Q9H1P6 137 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 NAA60Q9H7X0 242 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
LINC00339-202ENST00000416769 TRAV6A0A075B6T7 132 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 C3orf85A0A1B0GTC6 90 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 H7C2Y5 167 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 FCGR3BO75015 233 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 HPRT1P00492 218 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 LGALS1P09382 135 aaKnown RBP9.88□□□□□ -0.83
LINC00339-202ENST00000416769 CBX3Q13185 183 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 TMEM177Q53S58 311 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 SPAG16Q8N0X2 631 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 OR51H1Q8NH63 302 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 FLYWCH2Q96CP2 140 aaKnown RBP9.88□□□□□ -0.83
LINC00339-202ENST00000416769 MARVELD1Q9BSK0 173 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 NUDT15Q9NV35 164 aa9.88□□□□□ -0.83
LINC00339-202ENST00000416769 C19orf73Q9NVV2 129 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms