RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TMEM127O75204 238 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 HRASP01112 189 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 NAT1P18440 290 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 CBX5P45973 191 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 RFX2P48378 723 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 CD300EQ496F6 205 aaPredicted RBP11.41□□□□□ -0.58
UBXN4-203ENST00000416538 TMEM69Q5SWH9 247 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 SLC25A42Q86VD7 318 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 SGPP2Q8IWX5 399 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 Q8N402 240 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 ZBTB34Q8NCN2 500 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 MOB3AQ96BX8 217 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 IFT46Q9NQC8 304 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 TMEM140Q9NV12 185 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 A0A087WXM4 84 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 C2orf70A6NJV1 201 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 H0Y980 276 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 C3orf84H3BNL1 204 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 UPK2O00526 184 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 OR2C1O95371 312 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 PMP2P02689 132 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 RLN1P04808 185 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 TAS2R31P59538 309 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 CATR1Q13166 79 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 CASC10Q5T4H9 136 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 AADACL3Q5VUY0 350 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 LCN12Q6JVE5 192 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 CLEC19AQ6UXS0 136 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 SLC25A46Q96AG3 418 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 ZNF2Q9BSG1 426 aaPredicted RBP11.4□□□□□ -0.58
UBXN4-203ENST00000416538 EDA2RQ9HAV5 297 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 PLEKHA3Q9HB20 300 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 HRASLSQ9HDD0 168 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 PEMTQ9UBM1 199 aa11.4□□□□□ -0.58
UBXN4-203ENST00000416538 TMEM213A2RRL7 107 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 DPPA5A6NC42 116 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 ZNF785A8K8V0 405 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 TNFAIP8O95379 198 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 HPRT1P00492 218 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 CD7P09564 240 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 NQO2P16083 231 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 HERV-K104P61576 105 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 HAGHQ16775 308 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 DHRS11Q6UWP2 260 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 LYSMD2Q8IV50 215 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 CROCCP3Q8IVE0 287 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 OR4A5Q8NH83 315 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 S100A16Q96FQ6 103 aaKnown RBP11.39□□□□□ -0.59
UBXN4-203ENST00000416538 FUNDC2Q9BWH2 189 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 PLEKHA2Q9HB19 425 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 RETNQ9HD89 108 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 VCX3AQ9NNX9 186 aa11.39□□□□□ -0.59
UBXN4-203ENST00000416538 GGCTO75223 188 aaKnown RBP11.38□□□□□ -0.59
UBXN4-203ENST00000416538 PGLYRP1O75594 196 aaPredicted RBP11.38□□□□□ -0.59
UBXN4-203ENST00000416538 SMIM18P0DKX4 95 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 FOLR2P14207 255 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 HRH1P35367 487 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 ARL3P36405 182 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 MFAP2P55001 183 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 VBP1P61758 197 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 TATDN3Q17R31 274 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 DEFB114Q30KQ6 69 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 ZNF585BQ52M93 769 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 UNQ9165/PRO28630Q6UXU0 137 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 GPX8Q8TED1 209 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 WDR89Q96FK6 387 aaPredicted RBP11.38□□□□□ -0.59
UBXN4-203ENST00000416538 CITED4Q96RK1 184 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 NAA50Q9GZZ1 169 aaKnown RBP11.38□□□□□ -0.59
UBXN4-203ENST00000416538 ZC4H2Q9NQZ6 224 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 GAR1Q9NY12 217 aaKnown RBP11.38□□□□□ -0.59
UBXN4-203ENST00000416538 COMMD9Q9P000 198 aa11.38□□□□□ -0.59
UBXN4-203ENST00000416538 SACSQ9NZJ4 4579 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 RYR2Q92736 4967 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 DBX1A6NMT0 343 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 MARCH11A6NNE9 402 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 A8MWP6 167 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 LGALS9O00182 355 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 CD81P60033 236 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 WT1-ASQ06250 92 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 LINC00322Q6ZN03 302 aaPredicted RBP11.37□□□□□ -0.59
UBXN4-203ENST00000416538 GTSCR1Q86UQ5 136 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 OR2K2Q8NGT1 345 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 OR5H2Q8NGV7 314 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 ZNF502Q8TBZ5 544 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 FCAMRQ8WWV6 532 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 ZMAT4Q9H898 229 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 COMMD3Q9UBI1 195 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 MLXQ9UH92 298 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 NSG2Q9Y328 171 aa11.37□□□□□ -0.59
UBXN4-203ENST00000416538 F2RP25116 425 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 HLA-DMAP28067 261 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 GPR183P32249 361 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 PRSS3P35030 304 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 TAS2R46P59540 309 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 GPHB5Q86YW7 130 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
UBXN4-203ENST00000416538 DMBX1Q8NFW5 382 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms