RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ICAM4Q14773 271 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 FAM166AQ6J272 317 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 MED13Q9UHV7 2174 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 MYO18BQ8IUG5 2567 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 HERPUD1Q15011 391 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 MBNL2Q5VZF2 373 aaKnown RBP10.96□□□□□ -0.65
SCN1B-202ENST00000415950 HEPN1Q6WQI6 88 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 RAB1BQ9H0U4 201 aa10.96□□□□□ -0.65
SCN1B-202ENST00000415950 FOXD3Q9UJU5 478 aaPredicted RBP10.96□□□□□ -0.65
SCN1B-202ENST00000415950 HELZP42694 1942 aaKnown RBP10.96□□□□□ -0.65
SCN1B-202ENST00000415950 TMEM189A5PLL7 270 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 EFEMP2O95967 443 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 CLDN18P56856 261 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 ZNF506Q5JVG8 444 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 IGKV3D-11A0A0A0MRZ8 115 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 WNT9BO14905 357 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 MPDU1O75352 247 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 PRB4P10163 310 aaPredicted RBP10.96□□□□□ -0.66
SCN1B-202ENST00000415950 DRAM1Q8N682 238 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 P2RX4Q99571 388 aa10.96□□□□□ -0.66
SCN1B-202ENST00000415950 MRPL13Q9BYD1 178 aaKnown RBP10.96□□□□□ -0.66
SCN1B-202ENST00000415950 IGHV3OR16-13A0A075B7E8 117 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 IGHV3-74A0A0B4J1X5 117 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 MUC21A0A140T8X8 626 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 ZNF324O75467 553 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-202ENST00000415950 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
SCN1B-202ENST00000415950 HGFACQ04756 655 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 PMCHL1Q16048 86 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 MUC21Q5SSG8 566 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 RBPMS2Q6ZRY4 209 aaKnown RBP10.95□□□□□ -0.66
SCN1B-202ENST00000415950 TMEM183AQ8IXX5 376 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 CLDND2Q8NHS1 167 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 ODAMA1E959 279 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 KCNMB1Q16558 191 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 VOPP1Q96AW1 172 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 COL25A1Q9BXS0 654 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-202ENST00000415950 TCF19Q9Y242 345 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 PPIAL4EA0A075B759 164 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 PPIAL4DF5H284 164 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 PPIAL4FP0DN26 164 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 ATP5G3P48201 142 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 TFF3Q07654 80 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 MST1LQ2TV78 715 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 SMRP1Q8NCR6 262 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 GUCD1Q96NT3 240 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 DCTN5Q9BTE1 182 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 CISD1Q9NZ45 108 aaKnown RBP10.95□□□□□ -0.66
SCN1B-202ENST00000415950 C1RLQ9NZP8 487 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 PPIAL4AQ9Y536 164 aa10.95□□□□□ -0.66
SCN1B-202ENST00000415950 IGKV1-12A0A0C4DH73 117 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 IGKV1D-12P01611 117 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 FCGR2BP31994 310 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-202ENST00000415950 OPN3Q9H1Y3 402 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-202ENST00000415950 MS4A5Q9H3V2 200 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 UBTD1Q9HAC8 227 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 TMEM265A0A087WTH1 108 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 FAM19A2Q8N3H0 131 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 HIST1H2BLQ99880 126 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 ZFHX2Q9C0A1 2572 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-202ENST00000415950 TMEM210A6NLX4 147 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 CELA3AP09093 270 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 FOLR2P14207 255 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 GPX4P36969 197 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-202ENST00000415950 HSPE1P61604 102 aaKnown RBP10.94□□□□□ -0.66
SCN1B-202ENST00000415950 TM4SF20Q53R12 229 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 PEAR1Q5VY43 1037 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-202ENST00000415950 LEMD1Q68G75 181 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 SCNM1Q9BWG6 230 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 A0A0G2JMM0 328 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 A0A1W2PPB8 328 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 LOC390937A0A1W2PQ73 354 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 A0A1W2PRS3 328 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 KIR3DP1A8MWS1 328 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 C8orf88P0DMB2 117 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 LSM10Q969L4 123 aaKnown RBP10.94□□□□□ -0.66
SCN1B-202ENST00000415950 FAM131CQ96AQ9 280 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 TMEM45BQ96B21 275 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 SFRP2Q96HF1 295 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 GMPPAQ96IJ6 420 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-202ENST00000415950 DNAJC4Q9NNZ3 241 aa10.94□□□□□ -0.66
SCN1B-202ENST00000415950 CENPWQ5EE01 88 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 GCSAMLQ5JQS6 135 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 LINC00596Q86U02 117 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 ZNF645Q8N7E2 425 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 FGFBP3Q8TAT2 258 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 SPSB4Q96A44 273 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 NABP2Q9BQ15 211 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 DPRXA6NFQ7 191 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 C16orf97H3BN30 126 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 STAG3L2P0CL84 134 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 OR5R1Q8NH85 324 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 TMEM171Q8WVE6 324 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 SDF2L1Q9HCN8 221 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 C7orf71A4D174 169 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 A6NNC1 897 aa10.93□□□□□ -0.66
SCN1B-202ENST00000415950 NAPSAO96009 420 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms