RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 CTF1Q16619 201 aa10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 MRGPRG-AS1Q2M3A8 158 aa10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 OR4A47Q6IF82 309 aa10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 LYSMD2Q8IV50 215 aa10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 FAM223AQ8IWN6 122 aa10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 PUSL1Q8N0Z8 303 aaKnown RBP10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 ADAD2Q8NCV1 583 aaKnown RBP10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 GPX8Q8TED1 209 aa10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 MOB3AQ96BX8 217 aa10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 COMMD5Q9GZQ3 224 aa10.08□□□□□ -0.8
CTHRC1-202ENST00000415886 HMX3A6NHT5 357 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 GPR31O00270 319 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 RGS5O15539 181 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 NOL3O60936 208 aaKnown RBP10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 PGLYRP1O75594 196 aaPredicted RBP10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 PRH1P02810 166 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 SMIM18P0DKX4 95 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 HLA-GP17693 338 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 RCVRNP35243 200 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 BRWD1-AS2P59051 145 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 RPEL1Q2QD12 228 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 FAM209BQ5JX69 171 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 C10orf55Q5SWW7 151 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 ZNF343Q6P1L6 599 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 CLVS1Q8IUQ0 354 aaPredicted RBP10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 NECAP1Q8NC96 275 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 FAM110AQ9BQ89 295 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 PLEKHA2Q9HB19 425 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 AKIP1Q9NQ31 210 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 SLC2A9Q9NRM0 540 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 BET1LQ9NYM9 111 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 EXTL2Q9UBQ6 330 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 ADAM30Q9UKF2 790 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 ZNF257Q9Y2Q1 563 aa10.07□□□□□ -0.8
CTHRC1-202ENST00000415886 CYB5BO43169 146 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 SNAPC5O75971 98 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 OR2J3O76001 311 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 RLN1P04808 185 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 RPA2P15927 270 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 F2RP25116 425 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 LPAR6P43657 344 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 DEFA5Q01523 94 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 RNASE12Q5GAN4 147 aaKnown RBP10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 FCAMRQ8WWV6 532 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 DGCR14Q96DF8 476 aaKnown RBP10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 FBXL7Q9UJT9 491 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 ANAPC10Q9UM13 185 aa10.06□□□□□ -0.8
CTHRC1-202ENST00000415886 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 UPK2O00526 184 aa10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 TPPPO94811 219 aa10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 IL6RP08887 468 aaPredicted RBP10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 HIST1H1BP16401 226 aaKnown RBP10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 PSMB6P28072 239 aa10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 EXOSC2Q13868 293 aaKnown RBP10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 KLF5Q13887 457 aaPredicted RBP10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 TUBA4BQ9H853 241 aa10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 COMMD9Q9P000 198 aa10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 PEMTQ9UBM1 199 aa10.05□□□□□ -0.8
CTHRC1-202ENST00000415886 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 S1PR2O95136 353 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 KRASP01116 189 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 ZNF735P0CB33 412 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 PGAM2P15259 253 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 ALDH3B2P48448 385 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 C15orf32Q32M92 178 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 PHLDA2Q53GA4 152 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 RNASE10Q5GAN6 216 aaKnown RBP10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 GTSCR1Q86UQ5 136 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 SLC38A6Q8IZM9 456 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 OR9G4Q8NGQ1 327 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 IL17DQ8TAD2 202 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 THAP7Q9BT49 309 aaPredicted RBP10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 HINT2Q9BX68 163 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 HIPK2Q9H2X6 1198 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 TMEM140Q9NV12 185 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 FKBP11Q9NYL4 201 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 THYN1Q9P016 225 aa10.04□□□□□ -0.8
CTHRC1-202ENST00000415886 TEX22C9J3V5 150 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 E7EUB6 86 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 H0Y980 276 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 M0QYG6 137 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 TRAPPC2P0DI81 140 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 TRAPPC2BP0DI82 140 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 TMBIM6P55061 237 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 OR2B8PP59922 312 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 IL34Q6ZMJ4 242 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 OR52I2Q8NH67 350 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 EEF1AKMT3Q96AZ1 226 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 KLK11Q9UBX7 282 aa10.03□□□□□ -0.8
CTHRC1-202ENST00000415886 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.02□□□□□ -0.81
CTHRC1-202ENST00000415886 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.81
CTHRC1-202ENST00000415886 IZUMO1RA6ND01 250 aa10.02□□□□□ -0.81
CTHRC1-202ENST00000415886 MARCH11A6NNE9 402 aa10.02□□□□□ -0.81
CTHRC1-202ENST00000415886 GGCTO75223 188 aaKnown RBP10.02□□□□□ -0.81
CTHRC1-202ENST00000415886 TRBV12-3P01733 135 aa10.02□□□□□ -0.81
CTHRC1-202ENST00000415886 REG1AP05451 166 aa10.02□□□□□ -0.81
CTHRC1-202ENST00000415886 SERPINE2P07093 398 aa10.02□□□□□ -0.81
CTHRC1-202ENST00000415886 CRYGCP07315 174 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms