RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GNG12Q9UBI6 72 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 ARL2-SNX15V9GYD0 113 aa8.1□□□□□ -1.11
CD44-206ENST00000415148 SRRM5B3KS81 715 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 M0R1X1 148 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 SLC17A3O00476 420 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 NPSP0C0P6 89 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 CECR9P0C854 216 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 IRF2P14316 349 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 RAB7AP51149 207 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 FABP6P51161 128 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 LOXL3P58215 753 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 SELENOTP62341 195 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 RHOBP62745 196 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 RAB31Q13636 194 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 GCNT2Q8N0V5 402 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.09□□□□□ -1.11
CD44-206ENST00000415148 OR10G8Q8NGN5 311 aa8.09□□□□□ -1.11
CD44-206ENST00000415148 C9JCJ5 164 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 M0R143 59 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 AQP7O14520 342 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 AREGP15514 252 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 TIMP3P35625 211 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 PLA2G2CQ5R387 149 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 SPATA31B1PQ5VZV4 182 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 TEPPQ6URK8 271 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 ZNF705AQ6ZN79 300 aaPredicted RBP8.08□□□□□ -1.12
CD44-206ENST00000415148 VKORC1L1Q8N0U8 176 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 OR4S2Q8NH73 311 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 OCC1Q8TAD7 63 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 DDB2Q92466 427 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 CORO2AQ92828 525 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 C11orf52Q96A22 123 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 OPN3Q9H1Y3 402 aaPredicted RBP8.08□□□□□ -1.12
CD44-206ENST00000415148 MSL2Q9HCI7 577 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 CFAP47Q6ZTR5 3102 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 IGKV1D-17A0A075B6S4 117 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 K7EN84 100 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 IGHV3-13P01766 116 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 IGHV3-7P01780 117 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 GCHFRP30047 84 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 PAFAH1B2P68402 229 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 LTC4SQ16873 150 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 UTF1Q5T230 341 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 MIC13Q5XKP0 118 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 CNEP1R1Q8N9A8 125 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 Q8TCH9 128 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 C1orf159Q96HA4 380 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 UHRF2Q96PU4 802 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 SFXN3Q9BWM7 321 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 TMEM140Q9NV12 185 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 IL36BQ9NZH7 164 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 TCF19Q9Y242 345 aa8.08□□□□□ -1.12
CD44-206ENST00000415148 FOXA2Q9Y261 457 aaPredicted RBP8.08□□□□□ -1.12
CD44-206ENST00000415148 YTHDF2Q9Y5A9 579 aaKnown RBP8.08□□□□□ -1.12
CD44-206ENST00000415148 TRGV10A0A0A0MS01 117 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 IGHV2OR16-5A0A0B4J2B6 119 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 C15orf61A6NNL5 157 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 A8MXE2 369 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 CDX4O14627 284 aaPredicted RBP8.07□□□□□ -1.12
CD44-206ENST00000415148 IL6RP08887 468 aaPredicted RBP8.07□□□□□ -1.12
CD44-206ENST00000415148 ESDP10768 282 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 OR10J1P30954 320 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 EDDM3AQ14507 147 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 TPTE2P1Q5T6R2 138 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 ASPHD1Q5U4P2 390 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 TOMM20LQ6UXN7 152 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 ABHD12Q8N2K0 398 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 TMEM208Q9BTX3 173 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 IFI27L2Q9H2X8 130 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 PPIAL4AQ9Y536 164 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 DCHS1Q96JQ0 3298 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 TRAV3A0A0B4J244 114 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 IGHV1-18A0A0C4DH31 117 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 PRR33A8MZF0 331 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 FOXH1O75593 365 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 SERF1AO75920 110 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 CGB3P0DN86 165 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 CGB7P0DN87 165 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 COMPP49747 757 aaPredicted RBP8.07□□□□□ -1.12
CD44-206ENST00000415148 ATP5IP56385 69 aaPredicted RBP8.07□□□□□ -1.12
CD44-206ENST00000415148 HSPE1P61604 102 aaKnown RBP8.07□□□□□ -1.12
CD44-206ENST00000415148 EFNB3Q15768 340 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 ZCCHC14Q8WYQ9 949 aaKnown RBP8.07□□□□□ -1.12
CD44-206ENST00000415148 SARAFQ96BY9 339 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 ADTRPQ96IZ2 230 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 FAM234AQ9H0X4 552 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 TMEM14BQ9NUH8 114 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 SLC25A10Q9UBX3 287 aaPredicted RBP8.07□□□□□ -1.12
CD44-206ENST00000415148 PAM16Q9Y3D7 125 aa8.07□□□□□ -1.12
CD44-206ENST00000415148 TRBV9A0A0B4J1U6 114 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 ZNF134P52741 427 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 POU2AF1Q16633 256 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 KRTCAP3Q53RY4 240 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 HES3Q5TGS1 186 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 VWA1Q6PCB0 445 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 IGFL2Q6UWQ7 119 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 GCSAMQ8N6F7 178 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 OR2Z1Q8NG97 314 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 CMTM2Q8TAZ6 248 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 SSMEM1Q8WWF3 244 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms