RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 C7orf69Q9H7B7 122 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 Q9UFV3 132 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 DENND4CQ5VZ89 1909 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 PTBP3O95758 552 aaKnown RBP10.02□□□□□ -0.81
PTPRF-205ENST00000414879 TM4SF20Q53R12 229 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 NPFFR1Q9GZQ6 430 aa10.02□□□□□ -0.81
PTPRF-205ENST00000414879 C17orf98A8MV24 154 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 M0R1W7 72 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 ITGB1BP1O14713 200 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 WDFY1Q8IWB7 410 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 LEAP2Q969E1 77 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 VOPP1Q96AW1 172 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 SLC25A33Q9BSK2 321 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 FAM103A1Q9BTL3 118 aaKnown RBP10.01□□□□□ -0.81
PTPRF-205ENST00000414879 DOCK8Q8NF50 2099 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 ALPK2Q86TB3 2170 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 TMEM189A5PLL7 270 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 SIAH2O43255 324 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 NCMAPQ5T1S8 102 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 ZNF324BQ6AW86 544 aaPredicted RBP10.01□□□□□ -0.81
PTPRF-205ENST00000414879 RNASEKQ6P5S7 137 aaKnown RBP10.01□□□□□ -0.81
PTPRF-205ENST00000414879 CENPVQ7Z7K6 275 aaPredicted RBP10.01□□□□□ -0.81
PTPRF-205ENST00000414879 PPP1R27Q86WC6 154 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 WFIKKN1Q96NZ8 548 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 IFT22Q9H7X7 185 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 PGPA6NDG6 321 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 HERPUD1Q15011 391 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 COLCA1Q6ZS62 124 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 NPIPB3Q92617 1050 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 FUT9Q9Y231 359 aa10.01□□□□□ -0.81
PTPRF-205ENST00000414879 C15orf61A6NNL5 157 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 NDUFS8O00217 210 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 FCGR2BP31994 310 aaPredicted RBP10□□□□□ -0.81
PTPRF-205ENST00000414879 CAMPP49913 170 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 KRTDAPP60985 99 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 SNRPD3P62318 126 aaKnown RBP10□□□□□ -0.81
PTPRF-205ENST00000414879 ZNF672Q499Z4 452 aaPredicted RBP10□□□□□ -0.81
PTPRF-205ENST00000414879 TMEM155Q4W5P6 130 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 TMEM144Q7Z5S9 345 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 MRPL20Q9BYC9 149 aaKnown RBP10□□□□□ -0.81
PTPRF-205ENST00000414879 BET1LQ9NYM9 111 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 MED19A0JLT2 244 aaPredicted RBP10□□□□□ -0.81
PTPRF-205ENST00000414879 TMEM178BH3BS89 294 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 ZNF253O75346 499 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 NAPSAO96009 420 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 LCN2P80188 198 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 DGAT2L7PQ6IED9 249 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 LHFPL1Q86WI0 220 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 RAX2Q96IS3 184 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 SCN8AQ9UQD0 1980 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 IGKV1D-33P01593 117 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 IGKV1-33P01594 117 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 OR2D3Q8NGH3 330 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 DCTN5Q9BTE1 182 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 VAMP8Q9BV40 100 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 ARL2-SNX15V9GYD0 113 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 KIF26BQ2KJY2 2108 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 NCOR1O75376 2440 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 HLA-DQA1P01909 254 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 CEACAM8P31997 349 aaPredicted RBP10□□□□□ -0.81
PTPRF-205ENST00000414879 C2orf68Q2NKX9 166 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 MS4A10Q96PG2 267 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 ACACAQ13085 2346 aa10□□□□□ -0.81
PTPRF-205ENST00000414879 RIF1Q5UIP0 2472 aaKnown RBP9.99□□□□□ -0.81
PTPRF-205ENST00000414879 LY6DQ14210 128 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 PVRIGQ6DKI7 326 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 CYB561D1Q8N8Q1 229 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 ZNF738Q8NE65 137 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 OR4X2Q8NGF9 303 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 SAA2-SAA4A0A096LPE2 208 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 TRBV9A0A0B4J1U6 114 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 SAA2P0DJI9 122 aaPredicted RBP9.99□□□□□ -0.81
PTPRF-205ENST00000414879 APELAP0DMC3 54 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 GFI1Q99684 422 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 NPCDR1Q9BY65 106 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 HSPB8Q9UJY1 196 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 PTPRSQ13332 1948 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 TRGV3P03979 118 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 SLC25A16P16260 332 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 TMEM183BQ1AE95 376 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 PDZD11Q5EBL8 140 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 ZNF506Q5JVG8 444 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 IBA57Q5T440 356 aaKnown RBP9.99□□□□□ -0.81
PTPRF-205ENST00000414879 SPANXN1Q5VSR9 72 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 PRNTQ86SH4 94 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 HSPB7Q9UBY9 170 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 UFC1Q9Y3C8 167 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 MDC1Q14676 2089 aaKnown RBP9.99□□□□□ -0.81
PTPRF-205ENST00000414879 TDGF1P13385 188 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 PMCHP20382 165 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 DUTP33316 252 aaKnown RBP9.99□□□□□ -0.81
PTPRF-205ENST00000414879 FHL1Q13642 323 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 ZNF343Q6P1L6 599 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 PRSS22Q9GZN4 317 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 FBXL15Q9H469 300 aa9.99□□□□□ -0.81
PTPRF-205ENST00000414879 ZNF106Q9H2Y7 1883 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms