RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SLC2A9Q9NRM0 540 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 TNFSF12O43508 249 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 ENSAO43768 121 aaKnown RBP12.66□□□□□ -0.38
SHMT2-202ENST00000414700 FOXH1O75593 365 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 PRH1P02810 166 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 CXCL1P09341 107 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 P2RY1P47900 373 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 UCP3P55916 312 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 PIGPP57054 158 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 C1orf229Q6ZS94 237 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-202ENST00000414700 RAB9BQ9NP90 201 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 KCNS2Q9ULS6 477 aa12.66□□□□□ -0.38
SHMT2-202ENST00000414700 PROP1O75360 226 aa12.65□□□□□ -0.38
SHMT2-202ENST00000414700 CTSDP07339 412 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-202ENST00000414700 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
SHMT2-202ENST00000414700 PRSS57Q6UWY2 283 aa12.65□□□□□ -0.38
SHMT2-202ENST00000414700 TGIF2LXQ8IUE1 241 aa12.65□□□□□ -0.38
SHMT2-202ENST00000414700 OR10A7Q8NGE5 316 aa12.65□□□□□ -0.38
SHMT2-202ENST00000414700 ABHD14AQ9BUJ0 271 aa12.65□□□□□ -0.38
SHMT2-202ENST00000414700 IFI27L2Q9H2X8 130 aa12.65□□□□□ -0.38
SHMT2-202ENST00000414700 H3BQ15 152 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 TAGLN2P37802 199 aaKnown RBP12.64□□□□□ -0.39
SHMT2-202ENST00000414700 ECI1P42126 302 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 FHITP49789 147 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 LINC00205P59089 165 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 DRAM1Q8N682 238 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 NOL4LQ96MY1 436 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-202ENST00000414700 TMEM133Q9H2Q1 129 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 C14orf166Q9Y224 244 aaKnown RBP12.64□□□□□ -0.39
SHMT2-202ENST00000414700 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-202ENST00000414700 LSM5Q9Y4Y9 91 aaKnown RBP12.64□□□□□ -0.39
SHMT2-202ENST00000414700 ZNF727A8MUV8 499 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 E5RGE8 158 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 FABP4P15090 132 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 UBE2KP61086 200 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 KLRD1Q13241 179 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 PDZD11Q5EBL8 140 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 BTNL3Q6UXE8 466 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 ODF3L1Q8IXM7 274 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 RAB24Q969Q5 203 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 NSG2Q9Y328 171 aa12.64□□□□□ -0.39
SHMT2-202ENST00000414700 IGHV2-26A0A0B4J1V2 119 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 GPR137BO60478 399 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 IFNA21P01568 189 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 COX7A1P24310 79 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
SHMT2-202ENST00000414700 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 RPL39P5Q59GN2 51 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 ZNF343Q6P1L6 599 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 SLC25A48Q6ZT89 311 aaKnown RBP12.63□□□□□ -0.39
SHMT2-202ENST00000414700 ABHD12Q8N2K0 398 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 ZNF645Q8N7E2 425 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 RTN4IP1Q8WWV3 396 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-202ENST00000414700 RBMXL1Q96E39 390 aaKnown RBP12.63□□□□□ -0.39
SHMT2-202ENST00000414700 PACRGQ96M98 296 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-202ENST00000414700 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 KCNIP3Q9Y2W7 256 aa12.63□□□□□ -0.39
SHMT2-202ENST00000414700 SMCO3A2RU48 225 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 M0R1W7 72 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 TGOLN2O43493 480 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 RBP4P02753 201 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 MSMBP08118 114 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 MMP9P14780 707 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 FGF7P21781 194 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 LOXL1Q08397 574 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-202ENST00000414700 TMEM30BQ3MIR4 351 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 VMO1Q7Z5L0 202 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 CIARTQ8N365 385 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-202ENST00000414700 TNFRSF14Q92956 283 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 BSCL2Q96G97 398 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-202ENST00000414700 PCGF1Q9BSM1 259 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 NDUFAF3Q9BU61 184 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 SLC25A31Q9H0C2 315 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 SIRPDQ9H106 197 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 SAA2-SAA4A0A096LPE2 208 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 TGIF2-C20orf24A0A0A6YYL0 155 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 J3QR06 171 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 CYB5BO43169 146 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 TRGC2P03986 189 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 SAA2P0DJI9 122 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-202ENST00000414700 NHLH2Q02577 135 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 USF2Q15853 346 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-202ENST00000414700 SP6Q3SY56 376 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 GPR157Q5UAW9 335 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 TBC1D26Q86UD7 250 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 LYG1Q8N1E2 194 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 BEND2Q8NDZ0 799 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 FAM213BQ8TBF2 198 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 RARRES2Q99969 163 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 SH3BGRL3Q9H299 93 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 INSIG2Q9Y5U4 225 aa12.62□□□□□ -0.39
SHMT2-202ENST00000414700 RBFOX3A6NFN3 312 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 CRYM-AS1A6NIL9 109 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 A8MWP6 167 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 PGLYRP1O75594 196 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-202ENST00000414700 PRTN3P24158 256 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 DIAPH2-AS1Q14236 149 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 AKR1C8PQ5T2L2 129 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 GGNBP1Q5YKI7 109 aa12.61□□□□□ -0.39
SHMT2-202ENST00000414700 HCP5Q6MZN7 132 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms