RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 MTPNP58546 118 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 SEC61A1P61619 476 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 RPS11P62280 158 aaKnown RBP eCLIP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 SRSF9Q13242 221 aaKnown RBP eCLIP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 HES1Q14469 280 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 KIAA1644Q3SXP7 199 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 VMA21Q3ZAQ7 101 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 SPANXN4Q5MJ08 99 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF660Q6AZW8 331 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 SP5Q6BEB4 398 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 LCN8Q6JVE9 175 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF880Q6PDB4 577 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ACP7Q6ZNF0 438 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF493Q6ZR52 646 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 Q6ZVQ6 151 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 RPS19BP1Q86WX3 136 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 TCEANCQ8N8B7 351 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ZFP41Q8N8Y5 198 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 LY6G5BQ8NDX9 201 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 OR10AC1Q8NH08 325 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 OR52P1PQ8NH57 321 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 RPS4Y2Q8TD47 263 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 LMX1AQ8TE12 382 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 APOBEC4Q8WW27 367 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 KLK6Q92876 244 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF689Q96CS4 500 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 RTP4Q96DX8 246 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 NEURL3Q96EH8 262 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 LINC00526Q96FQ7 95 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 SOSTQ9BQB4 213 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 PRSS27Q9BQR3 290 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 THTPAQ9BU02 230 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 KLK15Q9H2R5 256 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 PARLQ9H300 379 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 LIME1Q9H400 295 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 PNRC2Q9NPJ4 139 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 RBM12B-AS1Q9P1G2 102 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 CACNG5Q9UF02 275 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 OR5V1Q9UGF6 321 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 RPUSD1Q9UJJ7 312 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 AMMECR1Q9Y4X0 333 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 ATP7BP35670 1465 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 PTPRFP10586 1907 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 HMGXB3Q12766 1538 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 URB2Q14146 1524 aaKnown RBP2.87□□□□□ -1.95
SF3B1-203ENST00000414174 LAMB4A4D0S4 1761 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 PLXNC1O60486 1568 aa2.87□□□□□ -1.95
SF3B1-203ENST00000414174 SIPA1L1O43166 1804 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 TARBP1Q13395 1621 aaKnown RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 CFTRP13569 1480 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 WI2-2373I1.2A0A1W2PRP0 233 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM250H0YL14 139 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 GABARAPH6UMI1 98 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 SMIM22K7EJ46 135 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 RRHO14718 337 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 GEMIN2O14893 280 aaKnown RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 SOCS1O15524 211 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 UBL3O95164 117 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 SFT2D2O95562 160 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 CYB5AP00167 134 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 MT-ATP8P03928 68 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 OR9G9P0C7N8 305 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 IGHV4-31P0DP07 118 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 RPL34P49207 117 aaKnown RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 CRISP3P54108 245 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 GFERP55789 205 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 SEC61BP60468 96 aaKnown RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 PPP1CAP62136 330 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 RPS18P62269 152 aaKnown RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 PAX8Q06710 450 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM187Q14656 261 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 RTL8BQ17RB0 113 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF718Q3SXZ3 478 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 PAGE3Q5JUK9 113 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 SLC25A30Q5SVS4 291 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 Q6ZN92 141 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 SHISA6Q6ZSJ9 500 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 NR2C2APQ86WQ0 139 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 MSRB3Q8IXL7 192 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 C3orf22Q8N5N4 141 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 OR4X2Q8NGF9 303 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 OR4K13Q8NH42 304 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 OTOSQ8NHW6 89 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF564Q8TBZ8 553 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 C2orf15Q8WU43 125 aaKnown RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 MAL2Q969L2 176 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 BORCS8Q96FH0 119 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 C18orf12Q96KH6 178 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 AQP10Q96PS8 301 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 METTL26Q96S19 204 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 GPX7Q96SL4 187 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 NMNAT3Q96T66 252 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 AICDAQ9GZX7 198 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 RPS10P5Q9NQ39 176 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 TMEM100Q9NV29 134 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 CHCHD2Q9Y6H1 151 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-203ENST00000414174 KCNE3Q9Y6H6 103 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 ABCA8O94911 1581 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 NRKQ7Z2Y5 1582 aa2.86□□□□□ -1.95
SF3B1-203ENST00000414174 SETBP1Q9Y6X0 1596 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms