RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 PDLIM3Q53GG5 364 aaPredicted RBP6.94□□□□□ -1.3
LINC02539-201ENST00000411615 THOC7Q6I9Y2 204 aaKnown RBP6.94□□□□□ -1.3
LINC02539-201ENST00000411615 LYZL2Q7Z4W2 148 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 ZNF429Q86V71 674 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 VKORC1L1Q8N0U8 176 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 OR52B4Q8NGK2 314 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 RBMXL1Q96E39 390 aaKnown RBP6.94□□□□□ -1.3
LINC02539-201ENST00000411615 TMEM68Q96MH6 324 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 DUX5Q96PT3 197 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 SRSF8Q9BRL6 282 aaKnown RBP6.94□□□□□ -1.3
LINC02539-201ENST00000411615 SEC22CQ9BRL7 303 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 ZNF430Q9H8G1 570 aaPredicted RBP6.94□□□□□ -1.3
LINC02539-201ENST00000411615 TNFRSF19Q9NS68 423 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.94□□□□□ -1.3
LINC02539-201ENST00000411615 TMEM14BQ9NUH8 114 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 PRNDQ9UKY0 176 aa6.94□□□□□ -1.3
LINC02539-201ENST00000411615 FOXA2Q9Y261 457 aaPredicted RBP6.94□□□□□ -1.3
LINC02539-201ENST00000411615 IGHV7-81A0A0B4J1V7 117 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 A0A0B4J293 547 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 C15orf61A6NNL5 157 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 FCN1O00602 326 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 PITX3O75364 302 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 ACTL6BO94805 426 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 IGF1P05019 195 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 OR9G9P0C7N8 305 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 SULT1A3P0DMM9 295 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 SULT1A4P0DMN0 295 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 COMPP49747 757 aaPredicted RBP6.93□□□□□ -1.3
LINC02539-201ENST00000411615 CRIP2P52943 208 aaPredicted RBP6.93□□□□□ -1.3
LINC02539-201ENST00000411615 CX3CL1P78423 397 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 SSX9Q7RTT3 188 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 OR1L8Q8NGR8 309 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 OR5B3Q8NH48 314 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 OR52E5Q8NH55 327 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 OR4A16Q8NH70 328 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 RNASE11Q8TAA1 199 aaKnown RBP6.93□□□□□ -1.3
LINC02539-201ENST00000411615 GPR146Q96CH1 333 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 SPIN2AQ99865 258 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 SPIN2BQ9BPZ2 258 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 COMMD5Q9GZQ3 224 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 OR51J1Q9H342 316 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 ZNF702PQ9H963 129 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 PRR13Q9NZ81 148 aa6.93□□□□□ -1.3
LINC02539-201ENST00000411615 ZFHX3Q15911 3703 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 TRAV3A0A0B4J244 114 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 A0A0G2JRQ6 117 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 A0A1B0GUS0 222 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 FAM90A26D6RGX4 464 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 INS-IGF2F8WCM5 200 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 AP4M1O00189 453 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 CA2P00918 260 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 IGLV1-40P01703 118 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 RPLP1P05386 114 aaKnown RBP6.92□□□□□ -1.3
LINC02539-201ENST00000411615 HKR1P10072 659 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 HSPE1P61604 102 aaKnown RBP6.92□□□□□ -1.3
LINC02539-201ENST00000411615 SSBP2P81877 361 aaPredicted RBP6.92□□□□□ -1.3
LINC02539-201ENST00000411615 TMEM267Q0VDI3 215 aaPredicted RBP6.92□□□□□ -1.3
LINC02539-201ENST00000411615 PJVKQ0ZLH3 352 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 SMCO1Q147U7 214 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 FXYD3Q14802 87 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 AKIRIN2Q53H80 203 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 GGNBP1Q5YKI7 109 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 Q6ZNX1 250 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 Q6ZRM9 215 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 Q6ZSV7 163 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 HSD17B13Q7Z5P4 300 aaPredicted RBP6.92□□□□□ -1.3
LINC02539-201ENST00000411615 SLC35E3Q7Z769 313 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 PRIMA1Q86XR5 153 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 OR4F5Q8NH21 305 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 OR2T6Q8NHC8 308 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 SGMS2Q8NHU3 365 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 GON7Q9BXV9 100 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 CACNG5Q9UF02 275 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 OR51B2Q9Y5P1 312 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 ALG5Q9Y673 324 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 TNCP24821 2201 aa6.92□□□□□ -1.3
LINC02539-201ENST00000411615 TEX50A0A1B0GTY4 177 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 ADAP1O75689 374 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 CNIH1O95406 144 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 BRI3O95415 125 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 LY86O95711 162 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 HOXB5P09067 269 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 EGR2P11161 476 aaPredicted RBP6.91□□□□□ -1.3
LINC02539-201ENST00000411615 RPL27AP46776 148 aaKnown RBP6.91□□□□□ -1.3
LINC02539-201ENST00000411615 OR2B8PP59922 312 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 SPCS3P61009 180 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 TNXAQ16473 311 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 GSG1LQ6UXU4 331 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 MRPL41Q8IXM3 137 aaKnown RBP6.91□□□□□ -1.3
LINC02539-201ENST00000411615 SRSF12Q8WXF0 261 aaKnown RBP6.91□□□□□ -1.3
LINC02539-201ENST00000411615 ARPC1AQ92747 370 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 C2orf50Q96LR7 162 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 CLCC1Q96S66 551 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 HSPB9Q9BQS6 159 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 QTRT1Q9BXR0 403 aaKnown RBP6.91□□□□□ -1.3
LINC02539-201ENST00000411615 WNT10AQ9GZT5 417 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 NDUFA4L2Q9NRX3 87 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 PLXNB1O43157 2135 aa6.91□□□□□ -1.3
LINC02539-201ENST00000411615 TET2Q6N021 2002 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms