RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 TMEM183AQ8IXX5 376 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.06□□□□□ -0.32
HOXD3-202ENST00000410016 ZNF439Q8NDP4 499 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 CBY1Q9Y3M2 126 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 ICE1Q9Y2F5 2266 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 RD3LP0DJH9 198 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 ARL14EPLP0DKL9 152 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 FAM3BP58499 235 aaPredicted RBP13.05□□□□□ -0.32
HOXD3-202ENST00000410016 RAB4BP61018 213 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 Q6ZS92 163 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 OR2T10Q8NGZ9 312 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 NPVFQ9HCQ7 196 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 RNF7Q9UBF6 113 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 FOXA2Q9Y261 457 aaPredicted RBP13.05□□□□□ -0.32
HOXD3-202ENST00000410016 TYMSP04818 313 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 TIMP3P35625 211 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 SRP14P37108 136 aaKnown RBP13.05□□□□□ -0.32
HOXD3-202ENST00000410016 HSPE1P61604 102 aaKnown RBP13.05□□□□□ -0.32
HOXD3-202ENST00000410016 DNLZQ5SXM8 178 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 PACRGQ96M98 296 aaPredicted RBP13.05□□□□□ -0.32
HOXD3-202ENST00000410016 LINC00574Q9H8X3 128 aa13.05□□□□□ -0.32
HOXD3-202ENST00000410016 TRBV20OR9-2A0A075B6H5 130 aa13.04□□□□□ -0.32
HOXD3-202ENST00000410016 IGHV1-46P01743 117 aa13.04□□□□□ -0.32
HOXD3-202ENST00000410016 ZNF114Q8NC26 417 aa13.04□□□□□ -0.32
HOXD3-202ENST00000410016 AURKAIP1Q9NWT8 199 aaPredicted RBP13.04□□□□□ -0.32
HOXD3-202ENST00000410016 IL19Q9UHD0 177 aa13.04□□□□□ -0.32
HOXD3-202ENST00000410016 IL6RP08887 468 aaPredicted RBP13.03□□□□□ -0.32
HOXD3-202ENST00000410016 CD99P14209 185 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 CHRNA7P36544 502 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 THBS3P49746 956 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 MRPS11P82912 194 aaKnown RBP13.03□□□□□ -0.32
HOXD3-202ENST00000410016 POU2AF1Q16633 256 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 C1orf185Q5T7R7 199 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 OR5T1Q8NG75 326 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 ZCCHC14Q8WYQ9 949 aaKnown RBP13.03□□□□□ -0.32
HOXD3-202ENST00000410016 GAFA1Q96PS6 74 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 RAB9BQ9NP90 201 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 IDI2-AS1Q9NZ38 188 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 DSCAML1Q8TD84 2053 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 PLCE1Q9P212 2302 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 TRGV10A0A0A0MS01 117 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 F6UZH7 168 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 MMP23AO75900 390 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 CXorf1O96002 111 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 COL8A2P25067 703 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 FAM27E3Q08E93 113 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 LYG1Q8N1E2 194 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 SLC24A4Q8NFF2 622 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 OR1P1Q8NH06 330 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 SSMEM1Q8WWF3 244 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 TXNDC17Q9BRA2 123 aa13.03□□□□□ -0.32
HOXD3-202ENST00000410016 SEPSECSQ9HD40 501 aaKnown RBP13.03□□□□□ -0.32
HOXD3-202ENST00000410016 MYOD1P15172 320 aa13.02□□□□□ -0.32
HOXD3-202ENST00000410016 NPY1RP25929 384 aa13.02□□□□□ -0.32
HOXD3-202ENST00000410016 TNFAIP6P98066 277 aaPredicted RBP13.02□□□□□ -0.32
HOXD3-202ENST00000410016 ACTL10Q5JWF8 245 aa13.02□□□□□ -0.32
HOXD3-202ENST00000410016 ZNF788Q6ZQV5 615 aa13.02□□□□□ -0.32
HOXD3-202ENST00000410016 DEFB108BQ8NET1 73 aa13.02□□□□□ -0.32
HOXD3-202ENST00000410016 PGPEP1LA6NFU8 196 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 K7EM74 188 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 CA2P00918 260 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 AMBPP02760 352 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 C1QTNF9P0C862 333 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 CEACAM8P31997 349 aaPredicted RBP13.02□□□□□ -0.33
HOXD3-202ENST00000410016 PDLIM4P50479 330 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 LCN2P80188 198 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 EFNB3Q15768 340 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 C9orf152Q5JTZ5 239 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 TEPPQ6URK8 271 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 CISD2Q8N5K1 135 aaKnown RBP13.02□□□□□ -0.33
HOXD3-202ENST00000410016 PFDN5Q99471 154 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 CCL13Q99616 98 aa13.02□□□□□ -0.33
HOXD3-202ENST00000410016 GAMTQ14353 236 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 PRSS8Q16651 343 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 STPG3Q8N7X2 389 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 RNASEH2CQ8TDP1 164 aaKnown RBP13.01□□□□□ -0.33
HOXD3-202ENST00000410016 CORO2AQ92828 525 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 ADTRPQ96IZ2 230 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 XKRY2A2RUG3 117 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 A8MXE2 369 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 RPL29P47914 159 aaKnown RBP13.01□□□□□ -0.33
HOXD3-202ENST00000410016 FAM216BQ8N7L0 139 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 RBMXL3Q8N7X1 1067 aaKnown RBP13.01□□□□□ -0.33
HOXD3-202ENST00000410016 TMEM37Q8WXS4 190 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 SNRNP40Q96DI7 357 aaKnown RBP13.01□□□□□ -0.33
HOXD3-202ENST00000410016 ACY3Q96HD9 319 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 SFXN3Q9BWM7 321 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
HOXD3-202ENST00000410016 YTHDF2Q9Y5A9 579 aaKnown RBP13.01□□□□□ -0.33
HOXD3-202ENST00000410016 SRRM4A7MD48 611 aaKnown RBP13□□□□□ -0.33
HOXD3-202ENST00000410016 CT45A6P0DMU7 189 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 CT45A5P0DMU8 189 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 CT45A7P0DMV0 189 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 CD40P25942 277 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 PRR20EP86478 221 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 PRR20CP86479 221 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 PRR20DP86480 221 aa13□□□□□ -0.33
HOXD3-202ENST00000410016 PRR20BP86481 221 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms