RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 A0A1B0GW64 132 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 SULT1C2O00338 296 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 OR2C1O95371 312 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 PTHLHP12272 177 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 HERV-K104P61576 105 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 POU2AF1Q16633 256 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 CLEC19AQ6UXS0 136 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 ADAMTSL5Q6ZMM2 481 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 S100A16Q96FQ6 103 aaKnown RBP11.15□□□□□ -0.63
CBX3-203ENST00000409747 CCDC140Q96MF4 163 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 COMMD5Q9GZQ3 224 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 THYN1Q9P016 225 aa11.15□□□□□ -0.63
CBX3-203ENST00000409747 RYR2Q92736 4967 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 STARD9Q9P2P6 4700 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 CSMD3Q7Z407 3707 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 A8MWP6 167 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 CYB5BO43169 146 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 XRCC3O43542 346 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 NDUFB8O95169 186 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 HLA-AP01891 365 aaKnown RBP11.14□□□□□ -0.63
CBX3-203ENST00000409747 GUCA2BQ16661 112 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 THOC7Q6I9Y2 204 aaKnown RBP11.14□□□□□ -0.63
CBX3-203ENST00000409747 C19orf35Q6ZS72 473 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 TMEM17Q86X19 198 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 LYSTQ99698 3801 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 PLEKHA2Q9HB19 425 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 COMMD9Q9P000 198 aa11.14□□□□□ -0.63
CBX3-203ENST00000409747 IGLV11-55A0A075B6I3 123 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 IGHV3-23P01764 117 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 OR2B8PP59922 312 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 UBE2NLQ5JXB2 153 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 AADACL3Q5VUY0 350 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 ZNF818PQ6ZRF7 136 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 DMBX1Q8NFW5 382 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 OR51H1Q8NH63 302 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 VCX3AQ9NNX9 186 aa11.13□□□□□ -0.63
CBX3-203ENST00000409747 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 UPK2O00526 184 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 REG1AP05451 166 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 FCER2P06734 321 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 CBLN1P23435 193 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 ERVK-16P61578 105 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 LINC00322Q6ZN03 302 aaPredicted RBP11.12□□□□□ -0.63
CBX3-203ENST00000409747 SLC16A13Q7RTY0 426 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 HSD17B13Q7Z5P4 300 aaPredicted RBP11.12□□□□□ -0.63
CBX3-203ENST00000409747 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 EHFQ9NZC4 300 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 LCE6AA0A183 80 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 CGB1A6NKQ9 187 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 OR11H12B2RN74 326 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 CD7P09564 240 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 TAS2R46P59540 309 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 TMEM69Q5SWH9 247 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 ZNF57Q68EA5 555 aaPredicted RBP11.12□□□□□ -0.63
CBX3-203ENST00000409747 IL17DQ8TAD2 202 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 QTRT1Q9BXR0 403 aaKnown RBP11.12□□□□□ -0.63
CBX3-203ENST00000409747 SRD5A3Q9H8P0 318 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 S4R3C0 116 aa11.12□□□□□ -0.63
CBX3-203ENST00000409747 SACSQ9NZJ4 4579 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 IGLC7A0M8Q6 106 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 TMEM213A2RRL7 107 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 S1PR2O95136 353 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 MYOD1P15172 320 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 ANKRD55Q3KP44 614 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 DEFB125Q8N687 156 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 MARC2Q969Z3 335 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
CBX3-203ENST00000409747 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
CBX3-203ENST00000409747 MFSD2BA6NFX1 497 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 CLEC3BP05452 202 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 GNRHRP30968 328 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 DHRS11Q6UWP2 260 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 CMTM1Q8IZ96 169 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 SAMD12Q8N8I0 201 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 OR5H2Q8NGV7 314 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 CACNG8Q8WXS5 425 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 MOB3AQ96BX8 217 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 ZNF2Q9BSG1 426 aaPredicted RBP11.1□□□□□ -0.63
CBX3-203ENST00000409747 ANAPC10Q9UM13 185 aa11.1□□□□□ -0.63
CBX3-203ENST00000409747 TRAV3A0A0B4J244 114 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 MARCH11A6NNE9 402 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 RLN1P04808 185 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 EDN2P20800 178 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 F2RP25116 425 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.63
CBX3-203ENST00000409747 GPR183P32249 361 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 TAS2R20P59543 309 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 TMEM61Q8N0U2 210 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 GDPD1Q8N9F7 314 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 ZNF502Q8TBZ5 544 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 UFC1Q9Y3C8 167 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 TENM2Q9NT68 2774 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 TRAPPC2P0DI81 140 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 TRAPPC2BP0DI82 140 aa11.09□□□□□ -0.63
CBX3-203ENST00000409747 ELLP55199 621 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms