RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CCL25O15444 150 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 RBX1P62877 108 aa12.86□□□□□ -0.35
LIMS2-205ENST00000409455 C17orf98A8MV24 154 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 PMCHP20382 165 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 CA6P23280 308 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 PSG7Q13046 419 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 WDR73Q6P4I2 378 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 RNASE8Q8TDE3 154 aaKnown RBP12.85□□□□□ -0.35
LIMS2-205ENST00000409455 GALMQ96C23 342 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 SFXN3Q9BWM7 321 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 SPTBN2O15020 2390 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 CLDN18P56856 261 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 ZNF766Q5HY98 468 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 Q8IYB0 196 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 TCTEX1D1Q8N7M0 179 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 YTHDF2Q9Y5A9 579 aaKnown RBP12.85□□□□□ -0.35
LIMS2-205ENST00000409455 LY96Q9Y6Y9 160 aa12.85□□□□□ -0.35
LIMS2-205ENST00000409455 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 C9JCJ5 164 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 NINJ1Q92982 152 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 APH1AQ96BI3 265 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 UHRF2Q96PU4 802 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 TAAR6Q96RI8 345 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 USF3Q68DE3 2245 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 SAA2-SAA4A0A096LPE2 208 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 NKX6-3A6NJ46 265 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 AQP7O14520 342 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 FRMD6-AS1P0C7T7 363 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
LIMS2-205ENST00000409455 PLP2Q04941 152 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 ZNF718Q3SXZ3 478 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 RNFT1Q5M7Z0 435 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 ST6GALNAC3Q8NDV1 305 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 POM121L2Q96KW2 1035 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 LINC00470Q9BZP3 86 aa12.84□□□□□ -0.35
LIMS2-205ENST00000409455 TRAV34A0A0B4J273 112 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 DPRXA6NFQ7 191 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 ITGB1BP1O14713 200 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-205ENST00000409455 EIF4EBP1Q13541 118 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-205ENST00000409455 DEFB109BQ30KR1 87 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 EAF1Q96JC9 268 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-205ENST00000409455 DEFB127Q9H1M4 99 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 POLDIP2Q9Y2S7 368 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 FRYQ5TBA9 3013 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 AKAP13Q12802 2813 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 A0A1W2PS18 150 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 RRHO14718 337 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 MT-CO2P00403 227 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 ARR3P36575 388 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 BRWD1-AS2P59051 145 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 UBE2V1Q13404 147 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 TREML4Q6UXN2 200 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 RTL8AQ9BWD3 113 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 V9GYV3 84 aa12.83□□□□□ -0.36
LIMS2-205ENST00000409455 ESPL1Q14674 2120 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 TRGV10A0A0A0MS01 117 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 NXPH2O95156 264 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 GCHFRP30047 84 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 COX19Q49B96 90 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 MIC13Q5XKP0 118 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 TMEM178AQ8NBL3 297 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 C11orf52Q96A22 123 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 RCHY1Q96PM5 261 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 ZNF83P51522 516 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 WDR31Q8NA23 367 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 MGST2Q99735 147 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 GGTLC1Q9BX51 225 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 BET1LQ9NYM9 111 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 COX11Q9Y6N1 276 aa12.82□□□□□ -0.36
LIMS2-205ENST00000409455 TMEM30CPA0ZSE6 113 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 TOMM40O96008 361 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 C3orf79P0CE67 100 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 PRRX1P54821 245 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 CX3CL1P78423 397 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 IGFBP7Q16270 282 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 C3AR1Q16581 482 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 SPATA46Q5T0L3 261 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 OR52L2PQ8NGH6 319 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 BORCS7Q96B45 105 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 WNT10AQ9GZT5 417 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 SLC35D1Q9NTN3 355 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 IGKV3D-15A0A087WSY6 115 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 ZNF891A8MT65 544 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-205ENST00000409455 K7EP13 123 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 SPINK4O60575 86 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 REG1AP05451 166 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 TSPOP30536 169 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 CDKN1BP46527 198 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 HINT1P49773 126 aaPredicted RBP12.81□□□□□ -0.36
LIMS2-205ENST00000409455 KIAA1644Q3SXP7 199 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 C19orf35Q6ZS72 473 aa12.81□□□□□ -0.36
LIMS2-205ENST00000409455 MRPS16Q9Y3D3 137 aaKnown RBP12.81□□□□□ -0.36
LIMS2-205ENST00000409455 C12orf77C9JDV5 145 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 CDIPTO14735 213 aa12.8□□□□□ -0.36
LIMS2-205ENST00000409455 GNG4P50150 75 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms