RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 LYG1Q8N1E2 194 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 NPCDR1Q9BY65 106 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 APOA2P02652 100 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 GFRA1P56159 465 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 DNLZQ5SXM8 178 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 TMEM147Q9BVK8 224 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 ZNF71Q9NQZ8 489 aaPredicted RBP10.86□□□□□ -0.67
PTPRN-202ENST00000409251 TMEM38BQ9NVV0 291 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 UQCR10Q9UDW1 63 aa10.86□□□□□ -0.67
PTPRN-202ENST00000409251 RALYQ9UKM9 306 aaKnown RBP10.86□□□□□ -0.67
PTPRN-202ENST00000409251 TRAV1-1A0A0B4J248 108 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 DPRXA6NFQ7 191 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 OR5A2Q8NGI9 324 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 OR4P4Q8NGL7 312 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 TRGV5A0A0B4J1U4 118 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 ETV2O00321 342 aaPredicted RBP10.85□□□□□ -0.67
PTPRN-202ENST00000409251 Q5PR19 223 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 ZNF841Q6ZN19 808 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 MMD2Q8IY49 270 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 PRSS33Q8NF86 280 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 OR52L2PQ8NGH6 319 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 FAM122AQ96E09 287 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 QTRT1Q9BXR0 403 aaKnown RBP10.85□□□□□ -0.67
PTPRN-202ENST00000409251 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 HYPMO75409 117 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 CLDN18P56856 261 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 DRAM1Q8N682 238 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 SSBP4Q9BWG4 385 aaPredicted RBP10.85□□□□□ -0.67
PTPRN-202ENST00000409251 SLC35D1Q9NTN3 355 aa10.85□□□□□ -0.67
PTPRN-202ENST00000409251 LIN7CQ9NUP9 197 aaKnown RBP10.85□□□□□ -0.67
PTPRN-202ENST00000409251 C17orf112F2Z3M2 114 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 AGFG2O95081 481 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 CD24P25063 80 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 TIMP3P35625 211 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 SAPCD1Q5SSQ6 148 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 MRGPRDQ8TDS7 321 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 KCNE4Q8WWG9 221 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 SPRR3Q9UBC9 169 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 FBLL1A6NHQ2 334 aaKnown RBP10.84□□□□□ -0.67
PTPRN-202ENST00000409251 K7EM74 188 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 FAM27BQ5VT28 67 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 PQLC2Q6ZP29 291 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 ABHD12Q8N2K0 398 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 PSMG3Q9BT73 122 aaPredicted RBP10.84□□□□□ -0.67
PTPRN-202ENST00000409251 C11orf1Q9H5F2 150 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 ANKRD30BLA7E2S9 258 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 TM4SF5O14894 197 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 SYNGR3O43761 229 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
PTPRN-202ENST00000409251 UQCRFS1P47985 274 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 FOXA3P55318 350 aaPredicted RBP10.84□□□□□ -0.67
PTPRN-202ENST00000409251 SPATA31B1PQ5VZV4 182 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 STUMQ69YW2 141 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 OR4B1Q8NGF8 309 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 CPT1CQ8TCG5 803 aa10.84□□□□□ -0.67
PTPRN-202ENST00000409251 TNRC6AQ8NDV7 1962 aaKnown RBP10.84□□□□□ -0.67
PTPRN-202ENST00000409251 hCG_38984A0A1B0GV85 526 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 CDIPTO14735 213 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 TOX4O94842 621 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 CELA3BP08861 270 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 PSG1P11464 419 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 FBLN7Q53RD9 439 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 COA6Q5JTJ3 125 aaKnown RBP10.83□□□□□ -0.68
PTPRN-202ENST00000409251 PRAMEF5Q5TYX0 476 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 PRAMEF6Q5VXH4 476 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 FAM216AQ8WUB2 273 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 CLEC5AQ9NY25 188 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 PSG11Q9UQ72 335 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 M0R2Z0 102 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 CSN3P07498 182 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 C3orf79P0CE67 100 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 CRYBB3P26998 211 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 PAFAH1B2P68402 229 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 HIST3H3Q16695 136 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 RPEL1Q2QD12 228 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 ACSF3Q4G176 576 aaPredicted RBP10.83□□□□□ -0.68
PTPRN-202ENST00000409251 TRAT1Q6PIZ9 186 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 TMEM54Q969K7 222 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 KLF13Q9Y2Y9 288 aaPredicted RBP10.83□□□□□ -0.68
PTPRN-202ENST00000409251 LRP5LA4QPB2 252 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 SH2D7A6NKC9 451 aaPredicted RBP10.83□□□□□ -0.68
PTPRN-202ENST00000409251 FCGR3BO75015 233 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 IGHV3-48P01763 117 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 RPL15P61313 204 aaKnown RBP10.83□□□□□ -0.68
PTPRN-202ENST00000409251 ALKBH6Q3KRA9 238 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 PYGO2Q9BRQ0 406 aa10.83□□□□□ -0.68
PTPRN-202ENST00000409251 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 NDUFB8O95169 186 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 GOSR1O95249 250 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 CTXN2P0C2S0 81 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 PAX1P15863 534 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 AESQ08117 197 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 TCTEX1D1Q8N7M0 179 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 RNF2Q99496 336 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 DLL3Q9NYJ7 618 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 KCNIP1Q9NZI2 227 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 TP53TG3Q9ULZ0 132 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 RRHO14718 337 aa10.82□□□□□ -0.68
PTPRN-202ENST00000409251 LCN2P80188 198 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms