RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 IGKV1D-33P01593 117 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 IGKV1-33P01594 117 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 FAM87AP0C7U9 286 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 SRD5A2P31213 254 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 RELBQ01201 579 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 GGNQ86UU5 652 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 OR4F5Q8NH21 305 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 IL1F10Q8WWZ1 152 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 RDH5Q92781 318 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 RAB1BQ9H0U4 201 aa13.57□□□□□ -0.24
COL4A3BP-204ENST00000405807 DEGS1O15121 323 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 GUSBP11Q6P575 273 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 TCF23Q7RTU1 214 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 RPS19BP1Q86WX3 136 aaKnown RBP13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 ZDHHC11Q9H8X9 412 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 LIN7CQ9NUP9 197 aaKnown RBP13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 UFC1Q9Y3C8 167 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 FAM90A26D6RGX4 464 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 VENTXO95231 258 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 GYPAP02724 150 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 NRN1LQ496H8 165 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 FAM78BQ5VT40 261 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 NEUROG1Q92886 237 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 GTF3C1Q12789 2109 aa13.56□□□□□ -0.24
COL4A3BP-204ENST00000405807 PGPEP1LA6NFU8 196 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 NPIPB11E5RHQ5 1161 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 F2Z2F3 143 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 SYNGR1O43759 233 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 COX6A1P12074 109 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 COX19Q49B96 90 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 TUSC5Q8IXB3 177 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 C19orf24Q9BVV8 132 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 NPFFR1Q9GZQ6 430 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 TEX48A0A1B0GUV7 120 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 A0A1W2PR80 420 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 FAM231BA6NCW3 169 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 ZNF207O43670 478 aaKnown RBP13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 TMEM14EPQ6UXP3 125 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 OR10D3Q8NH80 312 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 SLC25A40Q8TBP6 338 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 SLC25A22Q9H936 323 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 CRIM1Q9NZV1 1036 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 TP73-AS1Q9UF72 201 aa13.55□□□□□ -0.24
COL4A3BP-204ENST00000405807 TRAV24A0A0B4J272 114 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 HMGB3O15347 200 aaKnown RBP13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 IGLV2-14P01704 120 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 CELA3BP08861 270 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 ZNF585BQ52M93 769 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 OR10G9Q8NGN4 311 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 OR10G7Q8NGN6 311 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 OR1A1Q9P1Q5 309 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 A0A1W2PPV4 95 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 C3orf79P0CE67 100 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 SRFP11831 508 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 PPOXP50336 477 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 LHX2P50458 406 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 ACSM6Q6P461 480 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 NEIL1Q96FI4 390 aaPredicted RBP13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 KIAA1549Q9HCM3 1950 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 AMTP48728 403 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 ARF1P84077 181 aaKnown RBP13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 TLE1Q04724 770 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 STUMQ69YW2 141 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 RNF183Q96D59 192 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 MRPL16Q9NX20 251 aaKnown RBP13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 OCIAD1Q9NX40 245 aa13.54□□□□□ -0.24
COL4A3BP-204ENST00000405807 C5orf49A4QMS7 147 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 P04436 131 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 C12orf54Q6X4T0 127 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 FGFRL1Q8N441 504 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 OR10P1Q8NGE3 313 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 APOBEC3DQ96AK3 386 aaPredicted RBP13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 DLL3Q9NYJ7 618 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 KCNS2Q9ULS6 477 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 BRWD1Q9NSI6 2320 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 IGLL1P15814 213 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 FAM58AQ8N1B3 248 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 OR10X1Q8NGY0 326 aa13.53□□□□□ -0.24
COL4A3BP-204ENST00000405807 SDK1Q7Z5N4 2213 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 C7orf71A4D174 169 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 AGFG2O95081 481 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 IGHV3-9P01782 118 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 CELA3AP09093 270 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 COX5AP20674 150 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 GATAD1Q8WUU5 269 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 ZNF488Q96MN9 340 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 DUSP23Q9BVJ7 150 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.24
COL4A3BP-204ENST00000405807 SDK2Q58EX2 2172 aa13.52□□□□□ -0.25
COL4A3BP-204ENST00000405807 TRAV9-2A0A087WT02 112 aa13.52□□□□□ -0.25
COL4A3BP-204ENST00000405807 PAGE4O60829 102 aa13.52□□□□□ -0.25
COL4A3BP-204ENST00000405807 GALMQ96C23 342 aa13.52□□□□□ -0.25
COL4A3BP-204ENST00000405807 B5MCH6 92 aa13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 TNFRSF13BO14836 293 aaPredicted RBP13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 GATA2P23769 480 aaPredicted RBP13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 MEF2CQ06413 473 aaPredicted RBP13.51□□□□□ -0.25
COL4A3BP-204ENST00000405807 GAGE5Q13069 117 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms