RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 KITLGP21583 273 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 TIMP3P35625 211 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 ERVFC1-1P60608 527 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 Q8TCH9 128 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 WFIKKN1Q96NZ8 548 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 NEU1Q99519 415 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 NAGKQ9UJ70 344 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 ZZEF1O43149 2961 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 SCO2A0A1W2PP80 73 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 ADMP35318 185 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 ZNF718Q3SXZ3 478 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 MIC13Q5XKP0 118 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 TUBG2Q9NRH3 451 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 CLCF1Q9UBD9 225 aa16.38■□□□□ 0.21
CCDC47-202ENST00000403162 POLR3KQ9Y2Y1 108 aaPredicted RBP16.38■□□□□ 0.21
CCDC47-202ENST00000403162 TIMM8AO60220 97 aaPredicted RBP16.37■□□□□ 0.21
CCDC47-202ENST00000403162 OR10J1P30954 320 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 SELENOTP62341 195 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 CD177Q8N6Q3 437 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 OR10G8Q8NGN5 311 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 SARAFQ96BY9 339 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 TMEM204Q9BSN7 226 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 DCTN5Q9BTE1 182 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 JPT1Q9UK76 154 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 LSM4Q9Y4Z0 139 aaKnown RBP16.37■□□□□ 0.21
CCDC47-202ENST00000403162 PIEZO2Q9H5I5 2752 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 NUPR1O60356 82 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 ERVK-16P61578 105 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 RELBQ01201 579 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 MORN2Q502X0 79 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 FAM90A1Q86YD7 464 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 OCC1Q8TAD7 63 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 SDSLQ96GA7 329 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 MS4A10Q96PG2 267 aa16.37■□□□□ 0.21
CCDC47-202ENST00000403162 A0A1B0GUS0 222 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 FAM214BQ7L5A3 538 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 TCF23Q7RTU1 214 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 GCNT2Q8N0V5 402 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 DSPP15924 2871 aaKnown RBP16.36■□□□□ 0.21
CCDC47-202ENST00000403162 TRGV8A0A0C4DH27 118 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 TCAPO15273 167 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 YPEL1O60688 119 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 YPEL2Q96QA6 119 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 SNHG12Q9BXW3 62 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 GNG12Q9UBI6 72 aa16.36■□□□□ 0.21
CCDC47-202ENST00000403162 YTHDF2Q9Y5A9 579 aaKnown RBP16.36■□□□□ 0.21
CCDC47-202ENST00000403162 M0R1X1 148 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 PRDX2P32119 198 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 EDDM3AQ14507 147 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 GUSBP1Q15486 140 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 LTC4SQ16873 150 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 CMTM2Q8TAZ6 248 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 C11orf52Q96A22 123 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 C1orf159Q96HA4 380 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 NPVFQ9HCQ7 196 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 IL36BQ9NZH7 164 aa16.35■□□□□ 0.21
CCDC47-202ENST00000403162 TET2Q6N021 2002 aaPredicted RBP16.35■□□□□ 0.21
CCDC47-202ENST00000403162 A0A1B0GWJ7 208 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 AGFG2O95081 481 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 GCHFRP30047 84 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 HOXC12P31275 282 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 KIR2DS2P43631 304 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 CR1LQ2VPA4 569 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 MSL2Q9HCI7 577 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 LY96Q9Y6Y9 160 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 ESDP10768 282 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 ZNF124Q15973 351 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 ABHD12Q8N2K0 398 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 LRRC29Q8WV35 223 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 TMEM140Q9NV12 185 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 TCF19Q9Y242 345 aa16.34■□□□□ 0.21
CCDC47-202ENST00000403162 PRRC2CQ9Y520 2896 aaKnown RBP16.33■□□□□ 0.21
CCDC47-202ENST00000403162 C9JCJ5 164 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 IL6RP08887 468 aaPredicted RBP16.33■□□□□ 0.2
CCDC47-202ENST00000403162 PAFAH1B2P68402 229 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 KRTCAP3Q53RY4 240 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 VKORC1L1Q8N0U8 176 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 C1orf162Q8NEQ5 155 aaPredicted RBP16.33■□□□□ 0.2
CCDC47-202ENST00000403162 TRAV3A0A0B4J244 114 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 M0R143 59 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 RHOBP62745 196 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 RPL31P62899 125 aaKnown RBP16.33■□□□□ 0.2
CCDC47-202ENST00000403162 EFNB3Q15768 340 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 MBNL2Q5VZF2 373 aaKnown RBP16.33■□□□□ 0.2
CCDC47-202ENST00000403162 S1PR3Q99500 378 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 CBLN4Q9NTU7 201 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 TP53TG3Q9ULZ0 132 aa16.33■□□□□ 0.2
CCDC47-202ENST00000403162 K7EN84 100 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 F2RL2O00254 374 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 MT-CO2P00403 227 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 FABP6P51161 128 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 LOXL3P58215 753 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 ZNF90Q03938 601 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 MZT1Q08AG7 82 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 KLRB1Q12918 225 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 PRR30Q53SZ7 412 aaPredicted RBP16.32■□□□□ 0.2
CCDC47-202ENST00000403162 RPL39P5Q59GN2 51 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 SSMEM1Q8WWF3 244 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 SNRNP40Q96DI7 357 aaKnown RBP16.32■□□□□ 0.2
CCDC47-202ENST00000403162 TRIB1Q96RU8 372 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms