RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 MBD3L1Q8WWY6 194 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 STARD4Q96DR4 205 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 ZNF891A8MT65 544 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-201ENST00000401921 ZNF705FA8MVS1 300 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-201ENST00000401921 NDUFB4O95168 129 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 GCGP01275 180 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 GYPAP02724 150 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 ZNF705DP0CH99 300 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-201ENST00000401921 ZNF705BP0CI00 300 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-201ENST00000401921 CEACAM8P31997 349 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-201ENST00000401921 FAM3BP58499 235 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-201ENST00000401921 PCGF1Q9BSM1 259 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 LRFN3Q9BTN0 628 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 ZNF71Q9NQZ8 489 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-201ENST00000401921 CALYQ9NYX4 217 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 OR6C3Q9NZP0 311 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 HCFC1P51610 2035 aa6.4□□□□□ -1.38
HDAC9-201ENST00000401921 TNRC6BQ9UPQ9 1833 aaKnown RBP6.4□□□□□ -1.39
HDAC9-201ENST00000401921 A0A087WWC5 75 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 TRAV3A0A0B4J244 114 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 ZNF320A2RRD8 509 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 C1QTNF9BB2RNN3 333 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 IFNL4K9M1U5 179 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 IGHG3P01860 377 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 OR4A8P0C604 315 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 KITLGP21583 273 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 MORN2Q502X0 79 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 NUDT10Q8NFP7 164 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 P2RX4Q99571 388 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 PLEKHA3Q9HB20 300 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 TMEM140Q9NV12 185 aa6.4□□□□□ -1.39
HDAC9-201ENST00000401921 MDFIC2A0A1B0GVS7 189 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 AMBPP02760 352 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 DUTP33316 252 aaKnown RBP6.39□□□□□ -1.39
HDAC9-201ENST00000401921 MAS1LP35410 378 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 TFPI2P48307 235 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 FAM78BQ5VT40 261 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 KCNIP4Q6PIL6 250 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 TRAT1Q6PIZ9 186 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 WNK2Q9Y3S1 2297 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 IGKV1D-17A0A075B6S4 117 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 TRAV1-1A0A0B4J248 108 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 PGPEP1LA6NFU8 196 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 RRHO14718 337 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 KBTBD11O94819 623 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 REG1BP48304 166 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 TEX38Q6PEX7 206 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 GCSAMQ8N6F7 178 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 OR4S2Q8NH73 311 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 ABHD5Q8WTS1 349 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 CCL17Q92583 94 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 C5orf30Q96GV9 206 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 MANBALQ9NQG1 85 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 PLSCR4Q9NRQ2 329 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 RNF7Q9UBF6 113 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 FUT9Q9Y231 359 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 PXMP4Q9Y6I8 212 aa6.39□□□□□ -1.39
HDAC9-201ENST00000401921 LMO1P25800 156 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 ATP5G3P48201 142 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 SPRNQ5BIV9 151 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 TMEM183AQ8IXX5 376 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 RAB9BQ9NP90 201 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 TCF19Q9Y242 345 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 ASPMQ8IZT6 3477 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 PLXNB1O43157 2135 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 XKRY2A2RUG3 117 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 OR7C2O60412 319 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 MYOD1P15172 320 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 NPY1RP25929 384 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 RAB7AP51149 207 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 RPL23P62829 140 aaKnown RBP6.38□□□□□ -1.39
HDAC9-201ENST00000401921 DUX4L9Q6RFH8 374 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-201ENST00000401921 FAM216BQ8N7L0 139 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 C1orf162Q8NEQ5 155 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-201ENST00000401921 OR4P4Q8NGL7 312 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 OR2T10Q8NGZ9 312 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 CTDSP1Q9GZU7 261 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 GSX1Q9H4S2 264 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-201ENST00000401921 JPT1Q9UK76 154 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 SRRM5B3KS81 715 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 F6UZH7 168 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 ENSAO43768 121 aaKnown RBP6.38□□□□□ -1.39
HDAC9-201ENST00000401921 SPINK4O60575 86 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 MT-CO2P00403 227 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 ARL14EPLP0DKL9 152 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 BRS3P32247 399 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 THBS3P49746 956 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 PMS2P11Q13670 270 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 COL5A1-AS1Q5SY13 56 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 CYP2G1PQ6ZSU1 146 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 WFIKKN1Q96NZ8 548 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 MS4A5Q9H3V2 200 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 DYNLRB1Q9NP97 96 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 SLC35D1Q9NTN3 355 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 SERTAD4Q9NUC0 356 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 ZFP30Q9Y2G7 519 aa6.38□□□□□ -1.39
HDAC9-201ENST00000401921 PRRG2O14669 202 aa6.37□□□□□ -1.39
HDAC9-201ENST00000401921 TNFSF13O75888 250 aa6.37□□□□□ -1.39
HDAC9-201ENST00000401921 CHRNB4P30926 498 aa6.37□□□□□ -1.39
HDAC9-201ENST00000401921 GLRXP35754 106 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms