RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 NDUFA4O00483 81 aa13.08□□□□□ -0.32
UFD1-202ENST00000399523 MRPS14O60783 128 aaKnown RBP13.08□□□□□ -0.32
UFD1-202ENST00000399523 AMBPP02760 352 aa13.08□□□□□ -0.32
UFD1-202ENST00000399523 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.32
UFD1-202ENST00000399523 MRPS15P82914 257 aaKnown RBP13.08□□□□□ -0.32
UFD1-202ENST00000399523 SSX1Q16384 188 aa13.08□□□□□ -0.32
UFD1-202ENST00000399523 OR2B11Q5JQS5 317 aa13.08□□□□□ -0.32
UFD1-202ENST00000399523 VN1R17PQ8TDU5 208 aa13.08□□□□□ -0.32
UFD1-202ENST00000399523 C15orf61A6NNL5 157 aa13.07□□□□□ -0.32
UFD1-202ENST00000399523 SLC17A2O00624 439 aa13.07□□□□□ -0.32
UFD1-202ENST00000399523 RASSF2P50749 326 aa13.07□□□□□ -0.32
UFD1-202ENST00000399523 WNT4P56705 351 aa13.07□□□□□ -0.32
UFD1-202ENST00000399523 RPL8P62917 257 aaKnown RBP13.07□□□□□ -0.32
UFD1-202ENST00000399523 MS4A15Q8N5U1 240 aa13.07□□□□□ -0.32
UFD1-202ENST00000399523 OR4S2Q8NH73 311 aa13.07□□□□□ -0.32
UFD1-202ENST00000399523 C20orf24Q9BUV8 137 aa13.07□□□□□ -0.32
UFD1-202ENST00000399523 THYN1Q9P016 225 aa13.07□□□□□ -0.32
UFD1-202ENST00000399523 IGHV4-28A0A0C4DH34 117 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 CIB2O75838 187 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 BRWD1-AS2P59051 145 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 OR2B8PP59922 312 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 HSD17B12Q53GQ0 312 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 SPSB3Q6PJ21 355 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 Q6ZR54 194 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 MAPKAPK5-AS1Q8N8E1 139 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 MAFIPQ8WZ33 124 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 BSCL2Q96G97 398 aaPredicted RBP13.06□□□□□ -0.32
UFD1-202ENST00000399523 RNF2Q99496 336 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 GFI1Q99684 422 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 CENPOQ9BU64 300 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 SMPXQ9UHP9 88 aa13.06□□□□□ -0.32
UFD1-202ENST00000399523 RBMX2Q9Y388 322 aaKnown RBP13.06□□□□□ -0.32
UFD1-202ENST00000399523 IGLC7A0M8Q6 106 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 C15orf62A8K5M9 175 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 IGLV2-14P01704 120 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 HLA-GP17693 338 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 CRHBPP24387 322 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 ZFP1Q6P2D0 407 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 Q6ZS49 121 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 ZNF555Q8NEP9 628 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 ATP6V0BQ99437 205 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 PLGRKTQ9HBL7 147 aa13.05□□□□□ -0.32
UFD1-202ENST00000399523 IGHV3OR16-8A0A075B7F1 116 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 MYL12BO14950 172 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 ZNF207O43670 478 aaKnown RBP13.04□□□□□ -0.32
UFD1-202ENST00000399523 UCHL1P09936 223 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 MIFP14174 115 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 CD36P16671 472 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 TFPI2P48307 235 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 RAB3CQ96E17 227 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 HSD17B10Q99714 261 aaKnown RBP13.04□□□□□ -0.32
UFD1-202ENST00000399523 CHRDL1Q9BU40 450 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 DMBT1Q9UGM3 2413 aaPredicted RBP13.04□□□□□ -0.32
UFD1-202ENST00000399523 AGRNO00468 2067 aa13.04□□□□□ -0.32
UFD1-202ENST00000399523 APOBP04114 4563 aaKnown RBP13.03□□□□□ -0.32
UFD1-202ENST00000399523 J3QRK9 145 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 RAB27BO00194 218 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 CHEK1O14757 476 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 SLC22A5O76082 557 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 HRASP01112 189 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 HLA-DQB1P01920 261 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 EIF4EBP1Q13541 118 aaPredicted RBP13.03□□□□□ -0.32
UFD1-202ENST00000399523 RAB11BQ15907 218 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 FAM90A2PQ658T7 463 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 NANOGP1Q8N7R0 232 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 SRSF8Q9BRL6 282 aaKnown RBP13.03□□□□□ -0.32
UFD1-202ENST00000399523 RHPN1-AS1Q9BWJ2 59 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 BET1LQ9NYM9 111 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 OR2W1Q9Y3N9 320 aa13.03□□□□□ -0.32
UFD1-202ENST00000399523 IGKV1D-8A0A087WSZ0 117 aa13.02□□□□□ -0.33
UFD1-202ENST00000399523 ELOA3CA0A087WX78 387 aaPredicted RBP13.02□□□□□ -0.33
UFD1-202ENST00000399523 DEFB131BA0A096LNP1 70 aa13.02□□□□□ -0.33
UFD1-202ENST00000399523 DENRO43583 198 aaKnown RBP13.02□□□□□ -0.33
UFD1-202ENST00000399523 GIG44P09565 113 aaPredicted RBP13.02□□□□□ -0.33
UFD1-202ENST00000399523 C2orf76Q3KRA6 126 aa13.02□□□□□ -0.33
UFD1-202ENST00000399523 SOHLH1Q5JUK2 328 aa13.02□□□□□ -0.33
UFD1-202ENST00000399523 FAM3DQ96BQ1 224 aa13.02□□□□□ -0.33
UFD1-202ENST00000399523 NDUFAF3Q9BU61 184 aa13.02□□□□□ -0.33
UFD1-202ENST00000399523 IGHV7-4-1A0A0J9YVY3 117 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 ZNF705EA8MWA4 302 aaPredicted RBP13.01□□□□□ -0.33
UFD1-202ENST00000399523 F8W735 103 aaPredicted RBP13.01□□□□□ -0.33
UFD1-202ENST00000399523 MFNGO00587 321 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 ATP5HO75947 161 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 CLDN12P56749 244 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 PLA2G7Q13093 441 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 Q8N1X5 172 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 TMEM116Q8NCL8 245 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 TCTEX1D2Q8WW35 142 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 ZNF414Q96IQ9 312 aa13.01□□□□□ -0.33
UFD1-202ENST00000399523 SMPD3Q9NY59 655 aaPredicted RBP13.01□□□□□ -0.33
UFD1-202ENST00000399523 IGKV1D-13A0A0B4J2D9 117 aa13□□□□□ -0.33
UFD1-202ENST00000399523 CYB5BO43169 146 aa13□□□□□ -0.33
UFD1-202ENST00000399523 CD74P04233 296 aa13□□□□□ -0.33
UFD1-202ENST00000399523 IGKV1-13P0DP09 117 aa13□□□□□ -0.33
UFD1-202ENST00000399523 GNB3P16520 340 aa13□□□□□ -0.33
UFD1-202ENST00000399523 C12orf74Q32Q52 190 aa13□□□□□ -0.33
UFD1-202ENST00000399523 TIMM50Q3ZCQ8 353 aa13□□□□□ -0.33
UFD1-202ENST00000399523 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms