RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 GLRXP35754 106 aa8.22□□□□□ -1.09
SMAD9-203ENST00000399275 INSM1Q01101 510 aaPredicted RBP8.22□□□□□ -1.09
SMAD9-203ENST00000399275 C10orf128Q5T292 105 aa8.22□□□□□ -1.09
SMAD9-203ENST00000399275 GGTLC1Q9BX51 225 aa8.22□□□□□ -1.09
SMAD9-203ENST00000399275 FOXQ1Q9C009 403 aa8.22□□□□□ -1.09
SMAD9-203ENST00000399275 A0A1W2PQF6 199 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 FAM53AQ6NSI3 398 aaPredicted RBP8.21□□□□□ -1.09
SMAD9-203ENST00000399275 PLPPR2Q96GM1 343 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 AMELYQ99218 206 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 IGLV1-36A0A0B4J1U3 117 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 C9orf118A6NHY6 69 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 MGST3O14880 152 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 FHL5Q5TD97 284 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 CLDND2Q8NHS1 167 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 VKORC1Q9BQB6 163 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 C12orf49Q9H741 205 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 DTX4Q9Y2E6 619 aa8.21□□□□□ -1.09
SMAD9-203ENST00000399275 TRBV20OR9-2A0A075B6H5 130 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 ZNF815PA8K554 130 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 DPM2O94777 84 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 GUSBP1Q15486 140 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 KRTCAP3Q53RY4 240 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 RPS19BP1Q86WX3 136 aaKnown RBP8.21□□□□□ -1.1
SMAD9-203ENST00000399275 TMEM222Q9H0R3 208 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 PGPA6NDG6 321 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 NCR2O95944 276 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 CD46P15529 392 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 WFDC3Q8IUB2 231 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 ALKBH3Q96Q83 286 aaPredicted RBP8.21□□□□□ -1.1
SMAD9-203ENST00000399275 OR2H1Q9GZK4 316 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 RPRMQ9NS64 109 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 AMMECR1Q9Y4X0 333 aaPredicted RBP8.21□□□□□ -1.1
SMAD9-203ENST00000399275 SPTY2D1-AS1A0A0U1RR47 76 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 TMEM14DPA8MWL7 114 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 CDX4O14627 284 aaPredicted RBP8.21□□□□□ -1.1
SMAD9-203ENST00000399275 BRK1Q8WUW1 75 aa8.21□□□□□ -1.1
SMAD9-203ENST00000399275 MCM3APO60318 1980 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 IZUMO1RA6ND01 250 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 DEFB108AA8MXU0 73 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 RPL36A-HNRNPH2H7BZ11 118 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 TMEM196Q5HYL7 178 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 SCGB3A1Q96QR1 104 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 IGHV3-15A0A0B4J1V0 119 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 MSGN1A6NI15 193 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 NRG2O14511 850 aaPredicted RBP8.2□□□□□ -1.1
SMAD9-203ENST00000399275 PSG2P11465 335 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 CTGFP29279 349 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 GFERP55789 205 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 GFRA1P56159 465 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 PLA2G3Q9NZ20 509 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 PKIGQ9Y2B9 76 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 C9JAW5 83 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 E9PQ18 207 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 RPL31P62899 125 aaKnown RBP8.2□□□□□ -1.1
SMAD9-203ENST00000399275 CXorf66Q5JRM2 361 aaPredicted RBP8.2□□□□□ -1.1
SMAD9-203ENST00000399275 INO80CQ6PI98 192 aaPredicted RBP8.2□□□□□ -1.1
SMAD9-203ENST00000399275 TMEM52Q8NDY8 209 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 FAM222BQ8WU58 562 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 RBMY1BA6NDE4 496 aaKnown RBP8.2□□□□□ -1.1
SMAD9-203ENST00000399275 RBMY1EA6NEQ0 496 aaKnown RBP8.2□□□□□ -1.1
SMAD9-203ENST00000399275 RBMY1DP0C7P1 496 aaKnown RBP8.2□□□□□ -1.1
SMAD9-203ENST00000399275 RBMY1A1P0DJD3 496 aaKnown RBP8.2□□□□□ -1.1
SMAD9-203ENST00000399275 RBMY1CP0DJD4 496 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 LINC00596Q86U02 117 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 KIR2DL4Q99706 377 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 RNF122Q9H9V4 155 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 DECR2Q9NUI1 292 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 CRIM1Q9NZV1 1036 aa8.2□□□□□ -1.1
SMAD9-203ENST00000399275 SIP14410 1827 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 hDV102S1A0JD36 115 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 GHRHP01286 108 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 C3orf79P0CE67 100 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 TBR1Q16650 682 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 ANKRD39Q53RE8 183 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 DMRTC2Q8IXT2 367 aaPredicted RBP8.19□□□□□ -1.1
SMAD9-203ENST00000399275 LYG1Q8N1E2 194 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 GPR146Q96CH1 333 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 MARS2Q96GW9 593 aaKnown RBP8.19□□□□□ -1.1
SMAD9-203ENST00000399275 HRKO00198 91 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 TMEM256Q8N2U0 113 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 RFESDQ8TAC1 157 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 CHCHD1Q96BP2 118 aaKnown RBP8.19□□□□□ -1.1
SMAD9-203ENST00000399275 GNB1LQ9BYB4 327 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 SHISA8B8ZZ34 492 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 C22orf46C9J442 243 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 HYPMO75409 117 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 PLAUP00749 431 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 IL9P15248 144 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 TMEM187Q14656 261 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 RNF126Q9BV68 326 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 MRPL20Q9BYC9 149 aaKnown RBP8.19□□□□□ -1.1
SMAD9-203ENST00000399275 ZNF646O15015 1829 aaPredicted RBP8.19□□□□□ -1.1
SMAD9-203ENST00000399275 IGHV2OR16-5A0A0B4J2B6 119 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 IGHMP01871 453 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 CX3CL1P78423 397 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 CDCP2Q5VXM1 449 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 ASPHD2Q6ICH7 369 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 PAPPA2Q9BXP8 1791 aa8.19□□□□□ -1.1
SMAD9-203ENST00000399275 CCL25O15444 150 aa8.18□□□□□ -1.1
SMAD9-203ENST00000399275 CXCL13O43927 109 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms