RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 SCO2A0A1W2PP80 73 aa11.96□□□□□ -0.5
CCDC144A-205ENST00000399264 THBS3P49746 956 aa11.96□□□□□ -0.5
CCDC144A-205ENST00000399264 NUBP1P53384 320 aa11.96□□□□□ -0.5
CCDC144A-205ENST00000399264 TCF23Q7RTU1 214 aa11.96□□□□□ -0.5
CCDC144A-205ENST00000399264 TMEM183AQ8IXX5 376 aa11.96□□□□□ -0.5
CCDC144A-205ENST00000399264 OR1P1Q8NH06 330 aa11.96□□□□□ -0.5
CCDC144A-205ENST00000399264 RAI1Q7Z5J4 1906 aaPredicted RBP11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 YPEL1O60688 119 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 PDLIM3Q53GG5 364 aaPredicted RBP11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 LYG1Q8N1E2 194 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 YPEL2Q96QA6 119 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 JPT1Q9UK76 154 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 YTHDF2Q9Y5A9 579 aaKnown RBP11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 CUL9Q8IWT3 2517 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 IL3RAP26951 378 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 MLANAQ16655 118 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 PIP4P1Q86T03 277 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 TCTEX1D1Q8N7M0 179 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 DDB2Q92466 427 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 DIRC2Q96SL1 478 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 FAM215AQ9Y5M1 114 aa11.95□□□□□ -0.5
CCDC144A-205ENST00000399264 TANC2Q9HCD6 1990 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 GATA2P23769 480 aaPredicted RBP11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 FAM27E3Q08E93 113 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 OR4A47Q6IF82 309 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 FAM216BQ8N7L0 139 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 CCL13Q99616 98 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 DYSFO75923 2080 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 TLN1Q9Y490 2541 aaKnown RBP11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 F2RL2O00254 374 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 ACTL6BO94805 426 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 IGKV1-16P04430 117 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 FRMD6-AS1P0C7T7 363 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 CGB3P0DN86 165 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 CGB7P0DN87 165 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 GZMBP10144 247 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 ERVK-16P61578 105 aa11.94□□□□□ -0.5
CCDC144A-205ENST00000399264 NUPR1O60356 82 aa11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 LHBP01229 141 aa11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 KLF3P57682 345 aaPredicted RBP11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 AARDQ4LEZ3 155 aa11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 C14orf144Q96I85 54 aa11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 ZNF320A2RRD8 509 aa11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 SRRM4A7MD48 611 aaKnown RBP11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 GGCTO75223 188 aaKnown RBP11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 CA2P00918 260 aa11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 OCC1Q8TAD7 63 aa11.93□□□□□ -0.5
CCDC144A-205ENST00000399264 IL6RP08887 468 aaPredicted RBP11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 IGFBP2P18065 325 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 OPRK1P41145 380 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 GCM1Q9NP62 436 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 DEFA6Q01524 100 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 HLA-DRB5Q30154 266 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 ACTL10Q5JWF8 245 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 ASPHD1Q5U4P2 390 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 TMEM256Q8N2U0 113 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 SGMS2Q8NHU3 365 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 ZCCHC14Q8WYQ9 949 aaKnown RBP11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 RND1Q92730 232 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 LSM4Q9Y4Z0 139 aaKnown RBP11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 SLC17A3O00476 420 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 CD33P20138 364 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 PAX5Q02548 391 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 EFNB3Q15768 340 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 ANAPC16Q96DE5 110 aa11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 ZMAT5Q9UDW3 170 aaKnown RBP11.92□□□□□ -0.5
CCDC144A-205ENST00000399264 ZNF318Q5VUA4 2279 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 C15orf61A6NNL5 157 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 ZNF705GA8MUZ8 300 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 MRPS11P82912 194 aaKnown RBP11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 TRAT1Q6PIZ9 186 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 IDI2-AS1Q9NZ38 188 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 SPTA1P02549 2419 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 KBTBD11-OT1A0A1B0GTJ5 212 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 MBD3L4A6NDZ8 208 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 MBD3L3A6NE82 208 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 MBD3L5A6NJ08 208 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 TGOLN2O43493 480 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 VENTXO95231 258 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 LINC00469Q8N7U9 141 aa11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 MBD3L2Q8NHZ7 208 aaPredicted RBP11.91□□□□□ -0.5
CCDC144A-205ENST00000399264 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 K7EN84 100 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 PDE6DO43924 150 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 NPY1RP25929 384 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 GLRXP35754 106 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 CCL8P80075 99 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 MIR17HGQ75NE6 70 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 SLC24A4Q8NFF2 622 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 OR4P4Q8NGL7 312 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 IMMP2LQ96T52 175 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
CCDC144A-205ENST00000399264 IGHV1-46P01743 117 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms