RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 CEACAM1P13688 526 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 ZNRF1Q8ND25 227 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 OR4C13Q8NGP0 309 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 OR5R1Q8NH85 324 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 MAS1LP35410 378 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 LHX2P50458 406 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 ZNF497Q6ZNH5 498 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 TMEM116Q8NCL8 245 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 FGFBP3Q8TAT2 258 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 ESPL1Q14674 2120 aa13.81□□□□□ -0.2
CTDSP2-201ENST00000398073 SCO2A0A1W2PP80 73 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 A0A1W2PRD5 423 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 A0A1W2PRF3 423 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 A0A1W2PRM7 423 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 LGALS7P47929 136 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 NMSQ5H8A3 153 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 C5orf63A6NC05 138 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 IQCF6A8MYZ5 107 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 SLC25A17O43808 307 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 OTX1P32242 354 aaPredicted RBP13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 CLDN18P56856 261 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 HERPUD1Q15011 391 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 C12orf54Q6X4T0 127 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 ZCCHC14Q8WYQ9 949 aaKnown RBP13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 SOD3P08294 240 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 ZNF600Q6ZNG1 722 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 NDUFAF3Q9BU61 184 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 FOXJ2Q9P0K8 574 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 TMSB15BA0A087X1C1 80 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 SLC17A3O00476 420 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 KLF7O75840 302 aaPredicted RBP13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 COMPP49747 757 aaPredicted RBP13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 TMEM177Q53S58 311 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 GRAMD2BQ96HH9 432 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 ANAPC1Q9H1A4 1944 aa13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 PHF3Q92576 2039 aaKnown RBP13.8□□□□□ -0.2
CTDSP2-201ENST00000398073 CGAP01215 116 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 CXCL1P09341 107 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 ZNF71Q9NQZ8 489 aaPredicted RBP13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 UFC1Q9Y3C8 167 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 IGHV3-72A0A0B4J1Y9 119 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 NAPSAO96009 420 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 CECR9P0C854 216 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 JOSD1Q15040 202 aaPredicted RBP13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 ZFP30Q9Y2G7 519 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 HIST3H2BBQ8N257 126 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 NPIPB3Q92617 1050 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 LNP1A1A4G5 178 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 GPX4P36969 197 aaPredicted RBP13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 RELBQ01201 579 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 MST1LQ2TV78 715 aa13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 C1orf162Q8NEQ5 155 aaPredicted RBP13.79□□□□□ -0.2
CTDSP2-201ENST00000398073 K7ERU9 68 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 GLRXP35754 106 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 TMEM42Q69YG0 159 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 SNRNP200O75643 2136 aaKnown RBP13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 TMEM186Q96B77 213 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 IMMP2LQ96T52 175 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 HIST1H2BLQ99880 126 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 DPRXA6NFQ7 191 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 IGFBP2P18065 325 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 OR4A47Q6IF82 309 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 SSBP3Q9BWW4 388 aaPredicted RBP13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 DEPPQ9NTK1 212 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 SEMA5BQ9P283 1151 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 HSPB7Q9UBY9 170 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 IGKV3D-15A0A087WSY6 115 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 GOSR1O95249 250 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 CD55P08174 381 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 FOXC1Q12948 553 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 ATP1A1-AS1Q5TC04 95 aa13.78□□□□□ -0.2
CTDSP2-201ENST00000398073 PLXNA2O75051 1894 aa13.77□□□□□ -0.2
CTDSP2-201ENST00000398073 RPL30P62888 115 aaKnown RBP13.77□□□□□ -0.2
CTDSP2-201ENST00000398073 KRTCAP3Q53RY4 240 aa13.77□□□□□ -0.2
CTDSP2-201ENST00000398073 OSR1Q8TAX0 266 aaPredicted RBP13.77□□□□□ -0.2
CTDSP2-201ENST00000398073 PGLYRP4Q96LB8 373 aa13.77□□□□□ -0.2
CTDSP2-201ENST00000398073 TMUB1Q9BVT8 246 aa13.77□□□□□ -0.2
CTDSP2-201ENST00000398073 C1QTNF9BB2RNN3 333 aa13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 NDUFA2O43678 99 aa13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 SLC25A34Q6PIV7 304 aa13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 SLC25A33Q9BSK2 321 aa13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 IFI27L2Q9H2X8 130 aa13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 VSIRQ9H7M9 311 aa13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 RPL24P83731 157 aaKnown RBP13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 HOXA4Q00056 320 aaPredicted RBP13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 CCDC144NLQ6NUI1 221 aa13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 COL25A1Q9BXS0 654 aaPredicted RBP13.77□□□□□ -0.21
CTDSP2-201ENST00000398073 ERVFRD-1P60508 538 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 GGNQ86UU5 652 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 OR9G1Q8NH87 305 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 DCTN5Q9BTE1 182 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 WDR83OSQ9Y284 106 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 CTAG1AP78358 180 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 TMEM171Q8WVE6 324 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 TMEM189A5PLL7 270 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 ZNF883P0CG24 379 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 FAM90A1Q86YD7 464 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 M0QZ24 198 aa13.76□□□□□ -0.21
CTDSP2-201ENST00000398073 RAMP3O60896 148 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms