RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ZNF114Q8NC26 417 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 GNB4Q9HAV0 340 aa13.32□□□□□ -0.28
CHMP1A-201ENST00000397901 TRBV9A0A0B4J1U6 114 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 C17orf98A8MV24 154 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 CDX4O14627 284 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 LINC00205P59089 165 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 ERVK11-1P61568 191 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 OR10P1Q8NGE3 313 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 KCNS1Q96KK3 526 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 NPCDR1Q9BY65 106 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 KCNIP2Q9NS61 270 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 NCOR1O75376 2440 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 PSPNO60542 156 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 CRYAAP02489 173 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 TFF1P04155 84 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 RAC2P15153 192 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 TIMP3P35625 211 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 OR10J3Q5JRS4 329 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 UHRF2Q96PU4 802 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 KCNIP1Q9NZI2 227 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 POLDIP2Q9Y2S7 368 aa13.31□□□□□ -0.28
CHMP1A-201ENST00000397901 PMS2P5A8MQ11 134 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 C12orf77C9JDV5 145 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 CXorf67Q86X51 503 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 DERL1Q9BUN8 251 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 PGPEP1LA6NFU8 196 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 K7ERU9 68 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 HAND1O96004 215 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 C3orf79P0CE67 100 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 GABRA2P47869 451 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 PMCHL1Q16048 86 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 Q8IYB0 196 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 MUC15Q8N387 334 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 GALMQ96C23 342 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 WNT10AQ9GZT5 417 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 GP6Q9HCN6 339 aa13.3□□□□□ -0.28
CHMP1A-201ENST00000397901 TMEM238LA0A1B0GVL6 79 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 SNURFLB1AK76 121 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 P0C879 139 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 BRWD1-AS2P59051 145 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 AESQ08117 197 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 KRTCAP3Q53RY4 240 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 LRRC10Q5BKY1 277 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 C19orf35Q6ZS72 473 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 BCL2L2Q92843 193 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 PRRC2CQ9Y520 2896 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 A0A1W2PS18 150 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 WNT9BO14905 357 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 PMCHP20382 165 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 IER3P46695 156 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 ZNF146Q15072 292 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 GCSAMLQ5JQS6 135 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 STUMQ69YW2 141 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 GNB1LQ9BYB4 327 aa13.29□□□□□ -0.28
CHMP1A-201ENST00000397901 TMEM30CPA0ZSE6 113 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 HBZP02008 142 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 PSG1P11464 419 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 ATP5G3P48201 142 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 LGALS4P56470 323 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 TBC1D28Q2M2D7 210 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 ZNF826PQ6ZT77 177 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 NANOS1Q8WY41 292 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 IGHV3-43A0A0B4J1X8 118 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 C17orf112F2Z3M2 114 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 SMPD2O60906 423 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 ZNF324O75467 553 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 IGHV3-43DP0DP04 118 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 CATR1Q13166 79 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 H2BFWTQ7Z2G1 175 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 OR4F17Q8NGA8 305 aa13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 QTRT1Q9BXR0 403 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-201ENST00000397901 MED13Q9UHV7 2174 aa13.27□□□□□ -0.28
CHMP1A-201ENST00000397901 TRAV38-1A0A0B4J264 116 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 ZNF891A8MT65 544 aaPredicted RBP13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 C21orf140B9A014 251 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 TOX4O94842 621 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 TPRX1Q8N7U7 411 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 NINJ1Q92982 152 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 SFXN3Q9BWM7 321 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 ZNF83P51522 516 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 NIT1Q86X76 327 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 SLC25A40Q8TBP6 338 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 ZNF596Q8TC21 504 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 BORCS7Q96B45 105 aa13.27□□□□□ -0.29
CHMP1A-201ENST00000397901 TRBV20OR9-2A0A075B6H5 130 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 DEFB108AA8MXU0 73 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 MT-ND6P03923 174 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 MEOX1P50221 254 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 ARG2P78540 354 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 EIF4EBP1Q13541 118 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 TMEM249Q2WGJ8 235 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 TMEM164Q5U3C3 297 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 ZBTB34Q8NCN2 500 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 TXNDC17Q9BRA2 123 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 DEFB127Q9H1M4 99 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms