RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 OR51B2Q9Y5P1 312 aa18.78■□□□□ 0.6
TSPAN4-202ENST00000397396 TRAV3A0A0B4J244 114 aa18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 IFNA17P01571 189 aa18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 PSMB6P28072 239 aa18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 SPCS3P61009 180 aa18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 HSPE1P61604 102 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 ID3Q02535 119 aa18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 PDLIM3Q53GG5 364 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 TMEM219Q86XT9 240 aa18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 MRPL41Q8IXM3 137 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 OR2T35Q8NGX2 323 aa18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 ST6GAL2Q96JF0 529 aa18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 QTRT1Q9BXR0 403 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 GSX1Q9H4S2 264 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-202ENST00000397396 HOXA3O43365 443 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 HLA-DRB1P01911 266 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 PVALBP20472 110 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 S100A10P60903 97 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 TNFRSF9Q07011 255 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 FBLN7Q53RD9 439 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 C5orf56Q8N8D9 126 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 OR1L8Q8NGR8 309 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 CLCC1Q96S66 551 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 NEURL2Q9BR09 285 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 TPSG1Q9NRR2 321 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 CELSR1Q9NYQ6 3014 aa18.76■□□□□ 0.59
TSPAN4-202ENST00000397396 INAFM1C9JVW0 142 aa18.75■□□□□ 0.59
TSPAN4-202ENST00000397396 MBPP02686 304 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-202ENST00000397396 TNXAQ16473 311 aa18.75■□□□□ 0.59
TSPAN4-202ENST00000397396 CIB3Q96Q77 187 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-202ENST00000397396 JMJD8Q96S16 334 aa18.75■□□□□ 0.59
TSPAN4-202ENST00000397396 ENY2Q9NPA8 101 aa18.75■□□□□ 0.59
TSPAN4-202ENST00000397396 A0A1W2PN81 502 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 CA2P00918 260 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 CHRNA7P36544 502 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 RPL27AP46776 148 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 COMPP49747 757 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 RAB32Q13637 225 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 LRRC37A5PQ49AS3 106 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 CXorf66Q5JRM2 361 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 ZNF562Q6V9R5 426 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 THAP6Q8TBB0 222 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 SRSF8Q9BRL6 282 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 LSM5Q9Y4Y9 91 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 CEBPZOSA8MTT3 80 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 SYNGR2O43760 224 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 CNIH1O95406 144 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 MPC2O95563 127 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 FAM157CP0CG43 387 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 PRCDQ00LT1 54 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 HSD17B13Q7Z5P4 300 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 RAB40CQ96S21 281 aa18.74■□□□□ 0.59
TSPAN4-202ENST00000397396 SONP18583 2426 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 TEX50A0A1B0GTY4 177 aa18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 CLDN34H7C241 214 aa18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 K7EPK0 472 aa18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 HOXA1P49639 335 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 GNB1P62873 340 aa18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 MRGPRG-AS1Q2M3A8 158 aa18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 Q71RC1 249 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 PLEKHA3Q9HB20 300 aa18.73■□□□□ 0.59
TSPAN4-202ENST00000397396 L7N2F9 121 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 GPR137BO60478 399 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 CRLF1O75462 422 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 DEDDO75618 318 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 POLR2GP62487 172 aaKnown RBP eCLIP18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 VAMP2P63027 116 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 PJVKQ0ZLH3 352 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 PRSS54Q6PEW0 395 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 DTD1Q8TEA8 209 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 HIPK2Q9H2X6 1198 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 NDUFA4L2Q9NRX3 87 aa18.72■□□□□ 0.59
TSPAN4-202ENST00000397396 SVEP1Q4LDE5 3571 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 E5RGE8 158 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 INS-IGF2F8WCM5 200 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 KCNAB3O43448 404 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 NXPH3O95157 252 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 TAS2R30P59541 319 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 CX3CL1P78423 397 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 FXYD3Q14802 87 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 C11orf87Q6NUJ2 197 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 SRSF12Q8WXF0 261 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 ARPC1AQ92747 370 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 PPP1R14BQ96C90 147 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 NPFFR1Q9GZQ6 430 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 RBKSQ9H477 322 aa18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 RCL1Q9Y2P8 373 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-202ENST00000397396 DNAJC9-AS1A6NH13 148 aa18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 FCN1O00602 326 aa18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 CHST1O43916 411 aa18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 SSSCA1O60232 199 aa18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 SLC25A4P12235 298 aa18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 RPL15P61313 204 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 RPP30P78346 268 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 WDR89Q96FK6 387 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 HINT2Q9BX68 163 aa18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 MAGT1Q9H0U3 335 aa18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 WSB1Q9Y6I7 421 aa18.7■□□□□ 0.58
TSPAN4-202ENST00000397396 IGHV7-81A0A0B4J1V7 117 aa18.69■□□□□ 0.58
TSPAN4-202ENST00000397396 C1QBP02746 253 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms