RNA–Protein interactions for RNA: ENST00000397224.8

FOXRED2-204, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 4,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-204ENST00000397224 C19orf24Q9BVV8 132 aa13.16□□□□□ -0.3
FOXRED2-204ENST00000397224 CLEC7AQ9BXN2 247 aa13.16□□□□□ -0.3
FOXRED2-204ENST00000397224 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
FOXRED2-204ENST00000397224 TRAV24A0A0B4J272 114 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 GRIFINA4D1Z8 144 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 TMPRSS3P57727 454 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 OR4A47Q6IF82 309 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 PNKDQ8N490 385 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 LINC01560Q8TB33 94 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 FAM131CQ96AQ9 280 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 CD99P14209 185 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 MOSP00540 346 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 MGPP08493 103 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 PGLYRP4Q96LB8 373 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 PLXNA3P51805 1871 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 LOXL3P58215 753 aa13.15□□□□□ -0.3
FOXRED2-204ENST00000397224 SCN8AQ9UQD0 1980 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 THSD7BQ9C0I4 1608 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 C5orf63A6NC05 138 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 SRIP30626 198 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 TWIST1Q15672 202 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 FAM166AQ6J272 317 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 SSBP3Q9BWW4 388 aaPredicted RBP13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 TMEM106BQ9NUM4 274 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 KBTBD11-OT1A0A1B0GTJ5 212 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 TFF1P04155 84 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 RELBQ01201 579 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 RNF144BQ7Z419 303 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 CLDND2Q8NHS1 167 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 DOCK8Q8NF50 2099 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 IFITM10A6NMD0 228 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 COMPP49747 757 aaPredicted RBP13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 MFAP4P55083 255 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 CENPWQ5EE01 88 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 GGNQ86UU5 652 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 ELOVL5Q9NYP7 299 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 IGFBP2P18065 325 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 SLC25A33Q9BSK2 321 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 ELOVL1Q9BW60 279 aa13.14□□□□□ -0.31
FOXRED2-204ENST00000397224 MPDZO75970 2070 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 CGB1A6NKQ9 187 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 VENTXO95231 258 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 RPLP1P05386 114 aaKnown RBP13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 SFTPCP11686 197 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 TCTAP57738 103 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 CYP2G1PQ6ZSU1 146 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 B9A039 149 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 LHFPL1Q86WI0 220 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 OSR1Q8TAX0 266 aaPredicted RBP13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 RSPO3Q9BXY4 272 aaPredicted RBP13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 GBF1Q92538 1859 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 FGF16O43320 207 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 LIPFP07098 398 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 TMEM78Q5T7P6 136 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 CGAP01215 116 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 RPL7P18124 248 aaKnown RBP13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 CBLN1P23435 193 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 SUPT4H1P63272 117 aaKnown RBP13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 DNM1P46Q6ZS02 220 aa13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 MRPL32Q9BYC8 188 aaKnown RBP13.13□□□□□ -0.31
FOXRED2-204ENST00000397224 IGKV1-27A0A075B6S5 117 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 AMY1AP04745 511 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 KIR2DL2P43627 348 aaPredicted RBP13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 ID3Q02535 119 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 RBPMS2Q6ZRY4 209 aaKnown RBP13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 GTF3AQ92664 365 aaKnown RBP13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 FHL1Q13642 323 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 DGAT2L7PQ6IED9 249 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 IFI27L2Q9H2X8 130 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 PHF3Q92576 2039 aaKnown RBP13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 LOC105371267A0A1B0GV96 52 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 RNF224P0DH78 156 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 FAM209BQ5JX69 171 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 SCGB1D4Q6XE38 83 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 ZNF497Q6ZNH5 498 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 SRSF12Q8WXF0 261 aaKnown RBP13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 DDTP30046 118 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 LINC00305Q7Z4B0 112 aa13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 FNDC1Q4ZHG4 1894 aaPredicted RBP13.12□□□□□ -0.31
FOXRED2-204ENST00000397224 TRBV23-1A0A0A0MS06 115 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 PF4V1P10720 104 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 APOBEC3AP31941 199 aaPredicted RBP13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 ATP5G3P48201 142 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 BSPH1Q075Z2 132 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 MYOZ3Q8TDC0 251 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 ABHD17AQ96GS6 310 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 PI4KAP42356 2102 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 COL4A6Q14031 1691 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 RAMP3O60896 148 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 CD55P08174 381 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 CLEC2AQ6UVW9 174 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
FOXRED2-204ENST00000397224 TM4SF5O14894 197 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms