RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 C12orf49Q9H741 205 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 NCKAP5O14513 1909 aa7.64□□□□□ -1.19
CAPN3-206ENST00000397163 IGHV3-43A0A0B4J1X8 118 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 PSPNO60542 156 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 PPBPP02775 128 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 C3orf79P0CE67 100 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 IGHV3-43DP0DP04 118 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 GABRA2P47869 451 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 TCL1AP56279 114 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 AESQ08117 197 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 MED12LQ86YW9 2145 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 DEFB108AA8MXU0 73 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 SAP30O75446 220 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 GPX1P07203 203 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 ERVK11-1P61568 191 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 ZNF146Q15072 292 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 TMEM249Q2WGJ8 235 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 C16orf54Q6UWD8 224 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 CEP192Q8TEP8 1941 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 A0A1W2PN81 502 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 ZNF891A8MT65 544 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-206ENST00000397163 CXorf1O96002 111 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 PI4KAP42356 2102 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 CLDN18P56856 261 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 HTD2P86397 168 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 C3AR1Q16581 482 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 MDP1Q86V88 176 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 RFESDQ8TAC1 157 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 TXNDC17Q9BRA2 123 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 HEYLQ9NQ87 328 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-206ENST00000397163 B4GALT7Q9UBV7 327 aa7.63□□□□□ -1.19
CAPN3-206ENST00000397163 DPRXA6NFQ7 191 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 OOEPA6NGQ2 149 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 LINC00473A8K010 186 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 RRHO14718 337 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 LAMTOR5O43504 91 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 CFIP05156 583 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 STAG3L2P0CL84 134 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 STAG3L3P0CL85 134 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 RPL31P62899 125 aaKnown RBP7.62□□□□□ -1.19
CAPN3-206ENST00000397163 LTC4SQ16873 150 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 Q56UQ5 140 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 CXorf67Q86X51 503 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-206ENST00000397163 SSMEM1Q8WWF3 244 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 MEGF9Q9H1U4 602 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 SLC35D1Q9NTN3 355 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 PSG11Q9UQ72 335 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 OR9G9P0C7N8 305 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 OPRK1P41145 380 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 EIF4EBP1Q13541 118 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-206ENST00000397163 PRAMEF5Q5TYX0 476 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 PRAMEF6Q5VXH4 476 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 TPRX1Q8N7U7 411 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 OR2M7Q8NG81 312 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 GMPPAQ96IJ6 420 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-206ENST00000397163 CLUHP3Q96NS8 147 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 HES7Q9BYE0 225 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 NAT8BQ9UHF3 227 aa7.62□□□□□ -1.19
CAPN3-206ENST00000397163 YTHDF2Q9Y5A9 579 aaKnown RBP7.62□□□□□ -1.19
CAPN3-206ENST00000397163 WNT9BO14905 357 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 ZNF253O75346 499 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 MPDU1O75352 247 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 TFF1P04155 84 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 MAGEA5P43359 124 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 ZNF83P51522 516 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 HOXA4Q00056 320 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-206ENST00000397163 OR1C1Q15619 314 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 TBC1D28Q2M2D7 210 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 ALKBH6Q3KRA9 238 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 MPV17L2Q567V2 206 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 TREML4Q6UXN2 200 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 OR8I2Q8N0Y5 310 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 NANOS1Q8WY41 292 aaKnown RBP7.61□□□□□ -1.19
CAPN3-206ENST00000397163 MGST2Q99735 147 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 COL25A1Q9BXS0 654 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-206ENST00000397163 FAM234AQ9H0X4 552 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 MS4A5Q9H3V2 200 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 URB1O60287 2271 aaKnown RBP7.61□□□□□ -1.19
CAPN3-206ENST00000397163 TRAV9-1A0A075B6T8 112 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 K7EN84 100 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 K7ESF4 209 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 FCGR3BO75015 233 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 ESDP10768 282 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 GCHFRP30047 84 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 SSTR5P35346 364 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 PSG7Q13046 419 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 RPEL1Q2QD12 228 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 ZNF826PQ6ZT77 177 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 MMD2Q8IY49 270 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 OR4A16Q8NH70 328 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 PLPPR2Q96GM1 343 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 FAM173AQ9BQD7 235 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 GGTLC1Q9BX51 225 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 CHODLQ9H9P2 273 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 IL19Q9UHD0 177 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 A0A1W2PS18 150 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 LGALS4P56470 323 aa7.61□□□□□ -1.19
CAPN3-206ENST00000397163 TRIP6Q15654 476 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms