RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 H0Y980 276 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 UPK2O00526 184 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 LY86O95711 162 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 IFNA6P05013 189 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 IL6RP08887 468 aaPredicted RBP10.7□□□□□ -0.7
SEC13-204ENST00000397099 APELAP0DMC3 54 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 DEFA4P12838 97 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 TMBIM6P55061 237 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 SSBP1Q04837 148 aaKnown RBP10.7□□□□□ -0.7
SEC13-204ENST00000397099 SSX9Q7RTT3 188 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 ARRDC1Q8N5I2 433 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 OR9G4Q8NGQ1 327 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 ZNF486Q96H40 463 aaPredicted RBP10.7□□□□□ -0.7
SEC13-204ENST00000397099 FYTTD1Q96QD9 318 aaKnown RBP10.7□□□□□ -0.7
SEC13-204ENST00000397099 PRR25Q96S07 402 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 TSC22D3Q99576 134 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 SMAD5-AS1Q9Y6J3 95 aa10.7□□□□□ -0.7
SEC13-204ENST00000397099 TENM3Q9P273 2699 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.69□□□□□ -0.7
SEC13-204ENST00000397099 MARCH11A6NNE9 402 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 NOL3O60936 208 aaKnown RBP10.69□□□□□ -0.7
SEC13-204ENST00000397099 RLN1P04808 185 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 CTRB1P17538 263 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 PSMB6P28072 239 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 EXOSC2Q13868 293 aaKnown RBP10.69□□□□□ -0.7
SEC13-204ENST00000397099 C15orf32Q32M92 178 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 C10orf55Q5SWW7 151 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 CTRB2Q6GPI1 263 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 FCAMRQ8WWV6 532 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 CXorf58Q96LI9 332 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 GPHA2Q96T91 129 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 RSRP1Q9BUV0 290 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 QTRT1Q9BXR0 403 aaKnown RBP10.69□□□□□ -0.7
SEC13-204ENST00000397099 NAA50Q9GZZ1 169 aaKnown RBP10.69□□□□□ -0.7
SEC13-204ENST00000397099 TMEM140Q9NV12 185 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 EXTL2Q9UBQ6 330 aa10.69□□□□□ -0.7
SEC13-204ENST00000397099 RGS5O15539 181 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 SNAPC5O75971 98 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 S1PR2O95136 353 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 IGLV1-51P01701 117 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 GP9P14770 177 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 RPA2P15927 270 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 PTBP1P26599 531 aaKnown RBP eCLIP10.68□□□□□ -0.72e-7■■■■■ 31.3
SEC13-204ENST00000397099 OR2B8PP59922 312 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 ZNF45Q02386 682 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 RNASE10Q5GAN6 216 aaKnown RBP10.68□□□□□ -0.7
SEC13-204ENST00000397099 OR1L8Q8NGR8 309 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 OR2K2Q8NGT1 345 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 EEF1AKMT3Q96AZ1 226 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 FXYD6Q9H0Q3 95 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 MTFP1Q9UDX5 166 aa10.68□□□□□ -0.7
SEC13-204ENST00000397099 TRBV7-1A0A0A6YYK4 115 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 HMX3A6NHT5 357 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 GABARAPH6UMI1 98 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 GGCTO75223 188 aaKnown RBP10.67□□□□□ -0.7
SEC13-204ENST00000397099 B3GALNT1O75752 331 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 ATG12O94817 140 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 RPL5P46777 297 aaKnown RBP10.67□□□□□ -0.7
SEC13-204ENST00000397099 SYNJ2BPP57105 145 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 OR1L6Q8NGR2 347 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 OR5B3Q8NH48 314 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 ATP6V0BQ99437 205 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 CCDC59Q9P031 241 aaKnown RBP10.67□□□□□ -0.7
SEC13-204ENST00000397099 FBXL7Q9UJT9 491 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 PRNDQ9UKY0 176 aa10.67□□□□□ -0.7
SEC13-204ENST00000397099 E7EUB6 86 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 OR2J3O76001 311 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 PRH1P02810 166 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 TRAPPC2P0DI81 140 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 TRAPPC2BP0DI82 140 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 SPNP16150 400 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 LPAR6P43657 344 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 TAS2R19P59542 299 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 RND3P61587 244 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 LCN12Q6JVE5 192 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 CLVS1Q8IUQ0 354 aaPredicted RBP10.66□□□□□ -0.7
SEC13-204ENST00000397099 Q8N402 240 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 ZFAND1Q8TCF1 268 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 TMEM56Q96MV1 263 aa10.66□□□□□ -0.7
SEC13-204ENST00000397099 IGLV11-55A0A075B6I3 123 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 LGALS9O00182 355 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 BMPR1BO00238 502 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 KRASP01116 189 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 SERPINE2P07093 398 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 AREGP15514 252 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 MEF2DQ14814 521 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 ZNF585BQ52M93 769 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 TBC1D26Q86UD7 250 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 GPHB5Q86YW7 130 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 CCDC71LQ8N9Z2 235 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 OR52I2Q8NH67 350 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 LSM10Q969L4 123 aaKnown RBP10.65□□□□□ -0.7
SEC13-204ENST00000397099 WWC2-AS2Q96NR7 200 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 FANCD2OSQ96PS1 177 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 ABHD1Q96SE0 405 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 KLK11Q9UBX7 282 aa10.65□□□□□ -0.7
SEC13-204ENST00000397099 A0A1B0GW64 132 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 IGLC7A0M8Q6 106 aa10.64□□□□□ -0.71
SEC13-204ENST00000397099 CTDSPLO15194 276 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms