RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 NDUFA2O43678 99 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 PAGE4O60829 102 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 KBTBD11O94819 623 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 LIPFP07098 398 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 OR10J4P0C629 311 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 CTRB1P17538 263 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 S100PP25815 95 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 CTRB2Q6GPI1 263 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 ATRAIDQ6UW56 229 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 CYTL1Q9NRR1 136 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 C1orf196B1AJZ1 125 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 HTR1DP28221 377 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 Q6ZSR3 168 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 NUP37Q8NFH4 326 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 PCSK5Q92824 1860 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 TMEM68Q96MH6 324 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 CLEC7AQ9BXN2 247 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 RPUSD1Q9UJJ7 312 aaKnown RBP12.54□□□□□ -0.4
MCF2L-205ENST00000397017 CPAMD8Q8IZJ3 1885 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 H3BTX0 84 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 ECSCRQ19T08 205 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 FAM209BQ5JX69 171 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 VSTM2AQ8TAG5 236 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 WASHC3Q9Y3C0 194 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 CA2P00918 260 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 IGKV1-39P01597 117 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 IGKV1D-39P04432 117 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 OR10J1P30954 320 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 CEACAM3P40198 252 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 HTD2P86397 168 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 LDLRAD3Q86YD5 345 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 FAM24BQ8N5W8 94 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 DMRTA2Q96SC8 542 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 CBLN4Q9NTU7 201 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 IGHV3OR16-8A0A075B7F1 116 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 OR2C1O95371 312 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 GUSBP1Q15486 140 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 PRR27Q6MZM9 219 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 LHFPL4Q7Z7J7 247 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 PUSL1Q8N0Z8 303 aaKnown RBP12.53□□□□□ -0.4
MCF2L-205ENST00000397017 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 ZNF596Q8TC21 504 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 MIOXQ9UGB7 285 aa12.53□□□□□ -0.4
MCF2L-205ENST00000397017 FAM74A7A6NL05 159 aa12.52□□□□□ -0.4
MCF2L-205ENST00000397017 SAA1P0DJI8 122 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-205ENST00000397017 RPL11P62913 178 aaKnown RBP12.52□□□□□ -0.4
MCF2L-205ENST00000397017 FAM74A3Q4VXF1 159 aa12.52□□□□□ -0.4
MCF2L-205ENST00000397017 UTF1Q5T230 341 aa12.52□□□□□ -0.4
MCF2L-205ENST00000397017 OR1B1Q8NGR6 318 aa12.52□□□□□ -0.4
MCF2L-205ENST00000397017 SSBP3Q9BWW4 388 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-205ENST00000397017 ADGRG4Q8IZF6 3080 aa12.52□□□□□ -0.4
MCF2L-205ENST00000397017 SOD3P08294 240 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 DIAPH2-AS1Q14236 149 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 CLEC2AQ6UVW9 174 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 NANPQ8TBE9 248 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 PARP11Q9NR21 331 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 JMJD1CQ15652 2540 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 RRHO14718 337 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 RPL27AP46776 148 aaKnown RBP12.52□□□□□ -0.41
MCF2L-205ENST00000397017 RAB5BP61020 215 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 LYZP61626 148 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 LY6EQ16553 131 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 FKBP11Q9NYL4 201 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 MTORP42345 2549 aa12.52□□□□□ -0.41
MCF2L-205ENST00000397017 TRIM77I1YAP6 450 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 SPINK4O60575 86 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 LMO1P25800 156 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 NPBWR1P48145 328 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 CCL20P78556 96 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 CYB5R2Q6BCY4 276 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 LRTM2Q8N967 370 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 IFT22Q9H7X7 185 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 SMCO4Q9NRQ5 59 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 SHISA9B4DS77 424 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 MBP02144 154 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 WNT2P09544 360 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 CCL19Q99731 98 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 AMMECR1Q9Y4X0 333 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-205ENST00000397017 PXMP4Q9Y6I8 212 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 TRBV23-1A0A0A0MS06 115 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 S100A2P29034 98 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 PSG5Q15238 335 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 Q56UQ5 140 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 PDZD11Q5EBL8 140 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 TEPPQ6URK8 271 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 RAB24Q969Q5 203 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 SMIM8Q96KF7 97 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 GAB2Q9UQC2 676 aa12.51□□□□□ -0.41
MCF2L-205ENST00000397017 DANCRP0C864 163 aa12.5□□□□□ -0.41
MCF2L-205ENST00000397017 ARL16Q0P5N6 197 aa12.5□□□□□ -0.41
MCF2L-205ENST00000397017 MAPK1IP1LQ8NDC0 245 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms