RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 GLULP15104 373 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 P2RY4P51582 365 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 TUBA4BQ9H853 241 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 CUL9Q8IWT3 2517 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 SNAI3Q3KNW1 292 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 CBLN3Q6UW01 205 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 CLDND2Q8NHS1 167 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 ATXN8Q156A1 80 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 FAM219BQ5XKK7 198 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 DUX3Q96PT4 197 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 LGALS1P09382 135 aaKnown RBP8.89□□□□□ -0.99
COL4A4-201ENST00000396625 HIST1H2BAQ96A08 127 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 ZNF831Q5JPB2 1677 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 A8MWV9 139 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 HOXA3O43365 443 aaPredicted RBP8.89□□□□□ -0.99
COL4A4-201ENST00000396625 GPR146Q96CH1 333 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 ALX4Q9H161 411 aaPredicted RBP8.89□□□□□ -0.99
COL4A4-201ENST00000396625 HOXB3P14651 431 aaPredicted RBP8.89□□□□□ -0.99
COL4A4-201ENST00000396625 P2RY6Q15077 328 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 GAGE13Q4V321 117 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 OR4X2Q8NGF9 303 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 SPANXCQ9NY87 97 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 C2orf16Q68DN1 1984 aa8.89□□□□□ -0.99
COL4A4-201ENST00000396625 TMEM229AB2RXF0 380 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 ERVH48-1M5A8F1 160 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 PTP4A3O75365 173 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 INO80CQ6PI98 192 aaPredicted RBP8.88□□□□□ -0.99
COL4A4-201ENST00000396625 SF3B6Q9Y3B4 125 aaKnown RBP8.88□□□□□ -0.99
COL4A4-201ENST00000396625 SFTPCP11686 197 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 GGTLC2Q14390 218 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 CEACAM21Q3KPI0 293 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 ATG4DQ86TL0 474 aaPredicted RBP8.88□□□□□ -0.99
COL4A4-201ENST00000396625 CT55Q8WUE5 264 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 SPANXDQ9BXN6 97 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 SORL1Q92673 2214 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 C1orf174Q8IYL3 243 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 ORMDL3Q8N138 153 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 SPEM1Q8N4L4 309 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 EEF1AKMT3Q96AZ1 226 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 A0A1B0GW15 77 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 TGIF1Q15583 401 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 SAMD5Q5TGI4 173 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 RLFQ13129 1914 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 VENTXO95231 258 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 GCSAMQ8N6F7 178 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 HMGA2P52926 109 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 ZNF124Q15973 351 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 CCL13Q99616 98 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 SEMA5BQ9P283 1151 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 ST6GALNAC2Q9UJ37 374 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 PLXNB3Q9ULL4 1909 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 FAM90A26D6RGX4 464 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 HAX1O00165 279 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 CD69Q07108 199 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 TIMM23BQ5SRD1 257 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 C1orf185Q5T7R7 199 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 VKORC1Q9BQB6 163 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 MS4A5Q9H3V2 200 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 CST9LQ9H4G1 147 aa8.88□□□□□ -0.99
COL4A4-201ENST00000396625 RPP21Q9H633 154 aaKnown RBP8.88□□□□□ -0.99
COL4A4-201ENST00000396625 EDIL3O43854 480 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 CA7P43166 264 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 DCAF10Q5QP82 559 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 M0R2P5 195 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 PF4P02776 101 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 PRSS53Q2L4Q9 553 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 VWA8A3KMH1 1905 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 NTN1O95631 604 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 CXorf66Q5JRM2 361 aaPredicted RBP8.87□□□□□ -0.99
COL4A4-201ENST00000396625 S100A7L2Q5SY68 101 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 LHX8Q68G74 356 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 UCN2Q96RP3 112 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 PIMREGQ9BSJ6 248 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 TNFRSF6BO95407 300 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 GCHFRP30047 84 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 TBR1Q16650 682 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 LAMTOR2Q9Y2Q5 125 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 SCTP09683 121 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 ZNF729A6NN14 1252 aaPredicted RBP8.87□□□□□ -0.99
COL4A4-201ENST00000396625 C16orf97H3BN30 126 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 KLF4O43474 513 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 CT62P0C5K7 136 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 HOXD3P31249 432 aaPredicted RBP8.87□□□□□ -0.99
COL4A4-201ENST00000396625 CCL8P80075 99 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 FBXW9Q5XUX1 488 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 PLXNA3P51805 1871 aa8.87□□□□□ -0.99
COL4A4-201ENST00000396625 HIGD1CA8MV81 97 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 ZNF146Q15072 292 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 MARS2Q96GW9 593 aaKnown RBP8.86□□□□□ -0.99
COL4A4-201ENST00000396625 TRAV24A0A0B4J272 114 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 NPPCP23582 126 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 GPX4P36969 197 aaPredicted RBP8.86□□□□□ -0.99
COL4A4-201ENST00000396625 DNM1P46Q6ZS02 220 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 DEFB123Q8N688 67 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 SELENOHQ8IZQ5 122 aaKnown RBP8.86□□□□□ -0.99
COL4A4-201ENST00000396625 SHISA5Q8N114 240 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 TMEM252Q8N6L7 170 aa8.86□□□□□ -0.99
COL4A4-201ENST00000396625 PPIAL4EA0A075B759 164 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms