RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ROS1P08922 2347 aa13.56□□□□□ -0.24
TRIM39-205ENST00000396551 hADV38S2A0JD32 116 aa13.56□□□□□ -0.24
TRIM39-205ENST00000396551 PAGE4O60829 102 aa13.56□□□□□ -0.24
TRIM39-205ENST00000396551 MEOX2P50222 304 aa13.56□□□□□ -0.24
TRIM39-205ENST00000396551 RND2P52198 227 aa13.56□□□□□ -0.24
TRIM39-205ENST00000396551 HSPE1P61604 102 aaKnown RBP13.56□□□□□ -0.24
TRIM39-205ENST00000396551 ZNF674Q2M3X9 581 aa13.56□□□□□ -0.24
TRIM39-205ENST00000396551 RPUSD4Q96CM3 377 aaKnown RBP13.56□□□□□ -0.24
TRIM39-205ENST00000396551 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-205ENST00000396551 NKX6-3A6NJ46 265 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 TMEM250H0YL14 139 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 KBTBD11O94819 623 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-205ENST00000396551 CYP2G1PQ6ZSU1 146 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 SCNM1Q9BWG6 230 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 GGTLC1Q9BX51 225 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 TMEM242Q9NWH2 141 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 NAT8Q9UHE5 227 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 OR4F5Q8NH21 305 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 WFIKKN1Q96NZ8 548 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 OR4F4Q96R69 305 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 PARLQ9H300 379 aa13.55□□□□□ -0.24
TRIM39-205ENST00000396551 PTPRZ1P23471 2315 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-205ENST00000396551 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
TRIM39-205ENST00000396551 AP4M1O00189 453 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 MPDU1O75352 247 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 IGKV1-16P04430 117 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 CCL3L1P16619 93 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 OPRK1P41145 380 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 TMEM30BQ3MIR4 351 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 ARSJQ5FYB0 599 aaPredicted RBP13.54□□□□□ -0.24
TRIM39-205ENST00000396551 SAP30LQ9HAJ7 183 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 PATZ1Q9HBE1 687 aaKnown RBP13.54□□□□□ -0.24
TRIM39-205ENST00000396551 TMEM178BH3BS89 294 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 MIC13Q5XKP0 118 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 CLDN34H7C241 214 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 K7ENP7 123 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 OR13D1Q8NGV5 346 aa13.54□□□□□ -0.24
TRIM39-205ENST00000396551 LSM4Q9Y4Z0 139 aaKnown RBP13.54□□□□□ -0.24
TRIM39-205ENST00000396551 HRASP01112 189 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 NPPCP23582 126 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 NPY1RP25929 384 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 ADIRFQ15847 76 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 TMEM241Q24JQ0 296 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 LYPD2Q6UXB3 125 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 SLC24A4Q8NFF2 622 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 NEUROG1Q92886 237 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 RAB1CQ92928 201 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 SLC35D1Q9NTN3 355 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 PXMP4Q9Y6I8 212 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 CA2P00918 260 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 RPL23P62829 140 aaKnown RBP13.53□□□□□ -0.24
TRIM39-205ENST00000396551 RPL31P62899 125 aaKnown RBP13.53□□□□□ -0.24
TRIM39-205ENST00000396551 KIAA0141Q14154 515 aaPredicted RBP13.53□□□□□ -0.24
TRIM39-205ENST00000396551 OR51B2Q9Y5P1 312 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 ADGRG4Q8IZF6 3080 aa13.53□□□□□ -0.24
TRIM39-205ENST00000396551 TNCP24821 2201 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 PPIAL4EA0A075B759 164 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 PPIAL4DF5H284 164 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 TNFRSF13BO14836 293 aaPredicted RBP13.52□□□□□ -0.24
TRIM39-205ENST00000396551 PPIAL4FP0DN26 164 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 DMRTC2Q8IXT2 367 aaPredicted RBP13.52□□□□□ -0.24
TRIM39-205ENST00000396551 RND1Q92730 232 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 PPIAL4AQ9Y536 164 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 SHISA9B4DS77 424 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 UPK2O00526 184 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 MEF2CQ06413 473 aaPredicted RBP13.52□□□□□ -0.24
TRIM39-205ENST00000396551 TMEM200BQ69YZ2 307 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 ZNF833PQ6ZTB9 187 aa13.52□□□□□ -0.24
TRIM39-205ENST00000396551 TMEM249Q2WGJ8 235 aa13.52□□□□□ -0.25
TRIM39-205ENST00000396551 CCL17Q92583 94 aa13.52□□□□□ -0.25
TRIM39-205ENST00000396551 GAL3ST2Q9H3Q3 398 aa13.52□□□□□ -0.25
TRIM39-205ENST00000396551 NPVFQ9HCQ7 196 aa13.52□□□□□ -0.25
TRIM39-205ENST00000396551 SSMEM1Q8WWF3 244 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 RNASE6Q93091 150 aaKnown RBP13.51□□□□□ -0.25
TRIM39-205ENST00000396551 NEIL1Q96FI4 390 aaPredicted RBP13.51□□□□□ -0.25
TRIM39-205ENST00000396551 HINT2Q9BX68 163 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 TMEM106BQ9NUM4 274 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 C11orf94C9JXX5 98 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 E7EQL1 145 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 SOX15O60248 233 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 COL8A2P25067 703 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 BSXQ3C1V8 233 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 NCMAPQ5T1S8 102 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 C16orf82Q7Z2V1 217 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 OR10A7Q8NGE5 316 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 FAM210BQ96KR6 192 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 ZNF714Q96N38 554 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 MRPL20Q9BYC9 149 aaKnown RBP13.51□□□□□ -0.25
TRIM39-205ENST00000396551 CTDSP1Q9GZU7 261 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 PKDREJQ9NTG1 2253 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 A0A1W2PPV4 95 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 OPN1MWP04001 364 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 FAM87AP0C7U9 286 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 OPN1MW2P0DN77 364 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 OPN1MW3P0DN78 364 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 ATP5G3P48201 142 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 RTL8BQ17RB0 113 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 SLC16A13Q7RTY0 426 aa13.51□□□□□ -0.25
TRIM39-205ENST00000396551 C1orf87Q8N0U7 546 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms