RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 FOLR2P14207 255 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 OR2B8PP59922 312 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 POU2AF1Q16633 256 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 OR51H1Q8NH63 302 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 DYNLRB2Q8TF09 96 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 GIMAP1Q8WWP7 306 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 NEURL2Q9BR09 285 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 TUBA4BQ9H853 241 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 ZC4H2Q9NQZ6 224 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 ANAPC10Q9UM13 185 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 RYR2Q92736 4967 aa13.59□□□□□ -0.23
CXCL12-204ENST00000395793 TMEM213A2RRL7 107 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 LGALS9O00182 355 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 UPK2O00526 184 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 XRCC3O43542 346 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 ARL3P36405 182 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 RPS19P39019 145 aaKnown RBP13.58□□□□□ -0.24
CXCL12-204ENST00000395793 FAM209BQ5JX69 171 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 OR4A5Q8NH83 315 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 ISOC1Q96CN7 298 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 YIPF6Q96EC8 236 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 WDR89Q96FK6 387 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-204ENST00000395793 HRASLSQ9HDD0 168 aa13.58□□□□□ -0.24
CXCL12-204ENST00000395793 HPRT1P00492 218 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 RPA2P15927 270 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 GNRHRP30968 328 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 CBX5P45973 191 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 TAS2R31P59538 309 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 CATR1Q13166 79 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 GPHB5Q86YW7 130 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 LAX1Q8IWV1 398 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 DEFB125Q8N687 156 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 PALMDQ9NP74 551 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 TMEM140Q9NV12 185 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 EHFQ9NZC4 300 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 CEPT1Q9Y6K0 416 aa13.57□□□□□ -0.24
CXCL12-204ENST00000395793 RBMY1BA6NDE4 496 aaKnown RBP13.56□□□□□ -0.24
CXCL12-204ENST00000395793 RBMY1EA6NEQ0 496 aaKnown RBP13.56□□□□□ -0.24
CXCL12-204ENST00000395793 A8MWP6 167 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 TMEM127O75204 238 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 RBMY1DP0C7P1 496 aaKnown RBP13.56□□□□□ -0.24
CXCL12-204ENST00000395793 NQO2P16083 231 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 RFX2P48378 723 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 TAS2R20P59543 309 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 LSM3P62310 102 aaKnown RBP13.56□□□□□ -0.24
CXCL12-204ENST00000395793 UBE2NLQ5JXB2 153 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 AADACL3Q5VUY0 350 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 OR10W1Q8NGF6 305 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 EEF1AKMT3Q96AZ1 226 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 FAM110AQ9BQ89 295 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 FXYD6Q9H0Q3 95 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 IFT46Q9NQC8 304 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 MLXQ9UH92 298 aa13.56□□□□□ -0.24
CXCL12-204ENST00000395793 TPPPO94811 219 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 HIST1H1BP16401 226 aaKnown RBP13.55□□□□□ -0.24
CXCL12-204ENST00000395793 CBLN1P23435 193 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 HERV-K104P61576 105 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 GUCA2BQ16661 112 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 UNQ9165/PRO28630Q6UXU0 137 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 TMEM61Q8N0U2 210 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 SAMD12Q8N8I0 201 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 ZNF502Q8TBZ5 544 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 MOB3AQ96BX8 217 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 PLEKHA2Q9HB19 425 aa13.55□□□□□ -0.24
CXCL12-204ENST00000395793 TECRQ9NZ01 308 aaKnown RBP13.55□□□□□ -0.24
CXCL12-204ENST00000395793 LCE6AA0A183 80 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 DHFRP00374 187 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 PMP2P02689 132 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 RLN1P04808 185 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 DEFA4P12838 97 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 NAT1P18440 290 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 DHRS11Q6UWP2 260 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 S100A16Q96FQ6 103 aaKnown RBP13.54□□□□□ -0.24
CXCL12-204ENST00000395793 AIFM2Q9BRQ8 373 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 ZNF2Q9BSG1 426 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-204ENST00000395793 SRD5A3Q9H8P0 318 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 SLC2A8Q9NY64 477 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 COMMD9Q9P000 198 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 LYSTQ99698 3801 aa13.54□□□□□ -0.24
CXCL12-204ENST00000395793 ZNF320A2RRD8 509 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 OR11H12B2RN74 326 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 PGLYRP1O75594 196 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-204ENST00000395793 CLEC3BP05452 202 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 GPR183P32249 361 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 WT1-ASQ06250 92 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 TM4SF20Q53R12 229 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 CROCCP3Q8IVE0 287 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 UXS1Q8NBZ7 420 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 DMBX1Q8NFW5 382 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 QTRT1Q9BXR0 403 aaKnown RBP13.53□□□□□ -0.24
CXCL12-204ENST00000395793 COMMD5Q9GZQ3 224 aa13.53□□□□□ -0.24
CXCL12-204ENST00000395793 TRBV7-1A0A0A6YYK4 115 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 IGHV3-35A0A0C4DH35 117 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 TEX50A0A1B0GTY4 177 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 EIF4EP06730 217 aaKnown RBP13.52□□□□□ -0.25
CXCL12-204ENST00000395793 MFAP2P55001 183 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 FAM106AQ4KMX7 169 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms