RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 YPEL4Q96NS1 127 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 IGHV2-70DA0A0C4DH43 119 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 LOC102723971A0A1B0GUV8 181 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 PEA15Q15121 130 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 KCNIP2Q9NS61 270 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 DNASE2O00115 360 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 BRI3O95415 125 aa11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 A0A096LNT2 108 aa11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 IGKV1D-33P01593 117 aa11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 IGKV1-33P01594 117 aa11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 ZNF843Q8N446 348 aa11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 SLC24A4Q8NFF2 622 aa11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 RPRMQ9NS64 109 aa11.4□□□□□ -0.58
CDC42SE2-202ENST00000395246 RRHO14718 337 aa11.4□□□□□ -0.59
CDC42SE2-202ENST00000395246 ICAM4Q14773 271 aa11.4□□□□□ -0.59
CDC42SE2-202ENST00000395246 ALKBH2Q6NS38 261 aa11.4□□□□□ -0.59
CDC42SE2-202ENST00000395246 ACSM6Q6P461 480 aa11.4□□□□□ -0.59
CDC42SE2-202ENST00000395246 SLC35E1Q96K37 410 aa11.4□□□□□ -0.59
CDC42SE2-202ENST00000395246 HOXB4P17483 251 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 CRIP2P52943 208 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 GUK1Q16774 197 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 SPANXN5Q5MJ07 72 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 TMEM182Q6ZP80 229 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 SSX7Q7RTT5 188 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 SVBPQ8N300 66 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 RPP25LQ8N5L8 163 aaKnown RBP11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 SSX3Q99909 188 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 TXNDC17Q9BRA2 123 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 PBDC1Q9BVG4 233 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 PRRC2CQ9Y520 2896 aaKnown RBP11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 RAB11AP62491 216 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 PAX8Q06710 450 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 CLINT1Q14677 625 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 ETV3LQ6ZN32 361 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 TGIF2LXQ8IUE1 241 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 RCC1LQ96I51 464 aaKnown RBP11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 MGST2Q99735 147 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 NPVFQ9HCQ7 196 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 ZC4H2Q9NQZ6 224 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 LOC105371242A0A075B767 164 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 TEX22C9J3V5 150 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 C17orf112F2Z3M2 114 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 GNG10P50151 68 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 RPL8P62917 257 aaKnown RBP11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 PRSS8Q16651 343 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 SSX9Q7RTT3 188 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 TMEM144Q7Z5S9 345 aa11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 RNASE11Q8TAA1 199 aaKnown RBP11.39□□□□□ -0.59
CDC42SE2-202ENST00000395246 CTXND1A0A1B0GTU2 59 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 IGLC7A0M8Q6 106 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 ENSAO43768 121 aaKnown RBP11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 YIF1AO95070 293 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 SRP19P09132 144 aaKnown RBP11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 NFYBP25208 207 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 PPT1P50897 306 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 OR2B11Q5JQS5 317 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 HSD17B11Q8NBQ5 300 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 GGTLC1Q9BX51 225 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 LINC00869P0C866 280 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 GPR6P46095 362 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 FHITP49789 147 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 PSG5Q15238 335 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 MS4A7Q9GZW8 240 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 SLC35B3Q9H1N7 401 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 ZNRD1Q9P1U0 126 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 ZNF580Q9UK33 172 aa11.38□□□□□ -0.59
CDC42SE2-202ENST00000395246 A0A087WWC5 75 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 A0A1W2PPE3 182 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 RBFOX3A6NFN3 312 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 PLP1P60201 277 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 RUNX1Q01196 453 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 OR10X1Q8NGY0 326 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 SCGB1C1Q8TD33 95 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 SLC45A2Q9UMX9 530 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 ADGRG4Q8IZF6 3080 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 LYNX1G3V0Z9 82 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 TSPAN15O95858 294 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 LYNX1P0DP58 116 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 NPY1RP25929 384 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 ZFP36P26651 326 aaKnown RBP11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 DSCR9P59020 149 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 GUCA2BQ16661 112 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 SFTA3P0C7M3 94 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 FCGR2BP31994 310 aaPredicted RBP11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 UBE2E1P51965 193 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 LTC4SQ16873 150 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 VKORC1L1Q8N0U8 176 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 C10orf105Q8TEF2 133 aa11.37□□□□□ -0.59
CDC42SE2-202ENST00000395246 IGHV4-39P01824 125 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 FBP1P09467 338 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 FOLR2P14207 255 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 CCL20P78556 96 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 CD69Q07108 199 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 AKR1C8PQ5T2L2 129 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms