RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 MARVELD3Q96A59 401 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 CCL19Q99731 98 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 PCGF1Q9BSM1 259 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 MS4A7Q9GZW8 240 aaPredicted RBP15.38■□□□□ 0.05
CLDND1-203ENST00000394181 VSIRQ9H7M9 311 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 PRNDQ9UKY0 176 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 CENPEQ02224 2701 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 IGHV1-3A0A0C4DH29 117 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 SCO1O75880 301 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 CNTFRP26992 372 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 CLDND2Q8NHS1 167 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 INSIG2Q9Y5U4 225 aa15.38■□□□□ 0.05
CLDND1-203ENST00000394181 RAB19A4D1S5 217 aa15.37■□□□□ 0.05
CLDND1-203ENST00000394181 F2RL1P55085 397 aa15.37■□□□□ 0.05
CLDND1-203ENST00000394181 OR10W1Q8NGF6 305 aa15.37■□□□□ 0.05
CLDND1-203ENST00000394181 TAF15Q92804 592 aaKnown RBP eCLIP15.37■□□□□ 0.05
CLDND1-203ENST00000394181 ZP3P21754 424 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 RAB5CP51148 216 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 PAX2Q02962 417 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 LHFPL4Q7Z7J7 247 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 NARS2Q96I59 477 aaKnown RBP15.36■□□□□ 0.05
CLDND1-203ENST00000394181 CHD6Q8TD26 2715 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 CELSR1Q9NYQ6 3014 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 M0R1W7 72 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 SLC25A17O43808 307 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 PRTN3P24158 256 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 MC5RP33032 325 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 CCL20P78556 96 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 MRGPRG-AS1Q2M3A8 158 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 C10orf55Q5SWW7 151 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 CLCC1Q96S66 551 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 UQCC1Q9NVA1 299 aa15.36■□□□□ 0.05
CLDND1-203ENST00000394181 OR8U8P0C7N1 319 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 IL34Q6ZMJ4 242 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 ETV3LQ6ZN32 361 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 VMO1Q7Z5L0 202 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 OR11H6Q8NGC7 330 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 RPEQ96AT9 228 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 PINX1Q96BK5 328 aaKnown RBP15.35■□□□□ 0.05
CLDND1-203ENST00000394181 TMEM147Q9BVK8 224 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 C9JQL5 133 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 PRSS46E5RG02 174 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 TRIM77I1YAP6 450 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 EIF3GO75821 320 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLDND1-203ENST00000394181 TSPAN15O95858 294 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 CA2P00918 260 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 RAB13P51153 203 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 PRCDQ00LT1 54 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 AIFM2Q9BRQ8 373 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 ZNF430Q9H8G1 570 aaPredicted RBP15.35■□□□□ 0.05
CLDND1-203ENST00000394181 ZNF257Q9Y2Q1 563 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 HILPDAQ9Y5L2 63 aa15.35■□□□□ 0.05
CLDND1-203ENST00000394181 UMAD1C9J7I0 102 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 RPL8P62917 257 aaKnown RBP15.34■□□□□ 0.05
CLDND1-203ENST00000394181 ATP6V1FQ16864 119 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 VWC2Q2TAL6 325 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 AKR1C8PQ5T2L2 129 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 RPRMQ9NS64 109 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 A0A1B0GW64 132 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 A0A1W2PPI3 338 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 CGB1A6NKQ9 187 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 FGF7P21781 194 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 TMEM167AQ8TBQ9 72 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 PLEKHA3Q9HB20 300 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 LPAR2Q9HBW0 351 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 ENY2Q9NPA8 101 aa15.34■□□□□ 0.05
CLDND1-203ENST00000394181 KRBOX1C9JBD0 128 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 RNASEK-C17orf49H0YIS7 233 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 IFNA4P05014 189 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 MDKP21741 143 aaPredicted RBP15.33■□□□□ 0.04
CLDND1-203ENST00000394181 ELLP55199 621 aaPredicted RBP15.33■□□□□ 0.04
CLDND1-203ENST00000394181 TPTE2P1Q5T6R2 138 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 SPSB3Q6PJ21 355 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 SLC24A4Q8NFF2 622 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 C17orf50Q8WW18 174 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 SCRT1Q9BWW7 348 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 PARD6GQ9BYG4 376 aaPredicted RBP15.33■□□□□ 0.04
CLDND1-203ENST00000394181 TREM1Q9NP99 234 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 NDUFA4L2Q9NRX3 87 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 ZFHX3Q15911 3703 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 WNK2Q9Y3S1 2297 aa15.33■□□□□ 0.04
CLDND1-203ENST00000394181 ODF3BA8MYP8 253 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 TIMM23O14925 209 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 GOSR1O95249 250 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 CD24P25063 80 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 NPY1RP25929 384 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 HTR1DP28221 377 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 SNCAP37840 140 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 PDLIM4P50479 330 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 RPP30P78346 268 aaKnown RBP15.32■□□□□ 0.04
CLDND1-203ENST00000394181 FBLN7Q53RD9 439 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 UQCC3Q6UW78 93 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 SSX7Q7RTT5 188 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 COMMD5Q9GZQ3 224 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 AMMECR1Q9Y4X0 333 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-203ENST00000394181 ADCYAP1P18509 176 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 USF1P22415 310 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-203ENST00000394181 ZNF726P1Q15940 193 aa15.32■□□□□ 0.04
CLDND1-203ENST00000394181 SP5Q6BEB4 398 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-203ENST00000394181 DYNAPQ8N1N2 210 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms