RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 SLC35E1Q96K37 410 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 TBX15Q96SF7 602 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 MRPL18Q9H0U6 180 aaKnown RBP8.25□□□□□ -1.09
COL17A1-203ENST00000393211 IFI27L2Q9H2X8 130 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 IL17BQ9UHF5 180 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 SLC45A2Q9UMX9 530 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 SAA2-SAA4A0A096LPE2 208 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 PGPEP1LA6NFU8 196 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 ZNF705FA8MVS1 300 aaPredicted RBP8.25□□□□□ -1.09
COL17A1-203ENST00000393211 AQP7O14520 342 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 CECR9P0C854 216 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 ZNF705DP0CH99 300 aaPredicted RBP8.25□□□□□ -1.09
COL17A1-203ENST00000393211 ZNF705BP0CI00 300 aaPredicted RBP8.25□□□□□ -1.09
COL17A1-203ENST00000393211 CGB3P0DN86 165 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 CGB7P0DN87 165 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 TDGF1P3P51864 188 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 LINC00205P59089 165 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 ARSJQ5FYB0 599 aaPredicted RBP8.25□□□□□ -1.09
COL17A1-203ENST00000393211 ABHD12Q8N2K0 398 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 TPRX1Q8N7U7 411 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 SDSLQ96GA7 329 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 OSTCQ9NRP0 149 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 PLSCR4Q9NRQ2 329 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 AURKAIP1Q9NWT8 199 aaPredicted RBP8.25□□□□□ -1.09
COL17A1-203ENST00000393211 IL19Q9UHD0 177 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 PRNDQ9UKY0 176 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 ZNF257Q9Y2Q1 563 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 DNAJC13O75165 2243 aa8.25□□□□□ -1.09
COL17A1-203ENST00000393211 IGKV1D-17A0A075B6S4 117 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 IGHV2OR16-5A0A0B4J2B6 119 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 K7EN84 100 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 NUPR1O60356 82 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 CRYABP02511 175 aaKnown RBP8.24□□□□□ -1.09
COL17A1-203ENST00000393211 KIR2DL2P43627 348 aaPredicted RBP8.24□□□□□ -1.09
COL17A1-203ENST00000393211 FABP6P51161 128 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 EDDM3AQ14507 147 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 TMEM183BQ1AE95 376 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 OR10J3Q5JRS4 329 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 PQLC2Q6ZP29 291 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 TCF23Q7RTU1 214 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 MMD2Q8IY49 270 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 OR5AU1Q8NGC0 362 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 OR1L6Q8NGR2 347 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 TRIB1Q96RU8 372 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 DCTN5Q9BTE1 182 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 MSL2Q9HCI7 577 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 TECRQ9NZ01 308 aaKnown RBP8.24□□□□□ -1.09
COL17A1-203ENST00000393211 TP53TG3Q9ULZ0 132 aa8.24□□□□□ -1.09
COL17A1-203ENST00000393211 DOCK11Q5JSL3 2073 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 HELTA6NFD8 242 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 FCN1O00602 326 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 MMP23AO75900 390 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 AGFG2O95081 481 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 REG1AP05451 166 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 LINC00869P0C866 280 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 CD59P13987 128 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 TAS2R45P59539 299 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 CX3CL1P78423 397 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 RPL39P5Q59GN2 51 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 TPTE2P1Q5T6R2 138 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 Q6ZWC4 215 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 OR4P4Q8NGL7 312 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 SSMEM1Q8WWF3 244 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 LOXL4Q96JB6 756 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 GUCD1Q96NT3 240 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 RNF2Q99496 336 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 SEPSECSQ9HD40 501 aaKnown RBP8.23□□□□□ -1.09
COL17A1-203ENST00000393211 CBLN4Q9NTU7 201 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 CALYQ9NYX4 217 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 DUSP13Q9UII6 198 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 V9GYV3 84 aa8.23□□□□□ -1.09
COL17A1-203ENST00000393211 COL6A3P12111 3177 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 TRAV3A0A0B4J244 114 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 PRR33A8MZF0 331 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 ISLRO14498 428 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 SERF1AO75920 110 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 CA2P00918 260 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 TFF1P04155 84 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 OR5G3P0C626 314 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 BMP5P22003 454 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 CBLN1P23435 193 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 GNG4P50150 75 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 ZNF134P52741 427 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 LINC00310P59036 64 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 GAGE1Q13065 139 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 LTC4SQ16873 150 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 HLA-DRB5Q30154 266 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 C3orf36Q3SXR2 165 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 OR4A47Q6IF82 309 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 TOMM20LQ6UXN7 152 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 BAGE2Q86Y30 109 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 CNEP1R1Q8N9A8 125 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 SARAFQ96BY9 339 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 ARRDC1-AS1Q9H2J1 176 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 PARD6AQ9NPB6 346 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 HCFC1P51610 2035 aa8.22□□□□□ -1.09
COL17A1-203ENST00000393211 IGHV1-18A0A0C4DH31 117 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 A0A1W2PRE2 83 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms