RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 RAMP3O60896 148 aa13.87□□□□□ -0.19
SCN3B-202ENST00000392770 LYNX1P0DP58 116 aa13.87□□□□□ -0.19
SCN3B-202ENST00000392770 KIF26AQ9ULI4 1882 aaPredicted RBP13.87□□□□□ -0.19
SCN3B-202ENST00000392770 CYP2G1PQ6ZSU1 146 aa13.87□□□□□ -0.19
SCN3B-202ENST00000392770 RNF126Q9BV68 326 aa13.87□□□□□ -0.19
SCN3B-202ENST00000392770 MRPL32Q9BYC8 188 aaKnown RBP13.87□□□□□ -0.19
SCN3B-202ENST00000392770 LILRA1O75019 489 aa13.87□□□□□ -0.19
SCN3B-202ENST00000392770 MDKP21741 143 aaPredicted RBP13.87□□□□□ -0.19
SCN3B-202ENST00000392770 IBA57Q5T440 356 aaKnown RBP13.87□□□□□ -0.19
SCN3B-202ENST00000392770 OR5AL1P0C617 328 aa13.87□□□□□ -0.19
SCN3B-202ENST00000392770 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 TFPI2P48307 235 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 IFI27L2Q9H2X8 130 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 AMTP48728 403 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 ATP5IP56385 69 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-202ENST00000392770 NHLH1Q02575 133 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 C11orf42Q8N5U0 333 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 IGHV3-23P01764 117 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 HOXA4Q00056 320 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-202ENST00000392770 C19orf24Q9BVV8 132 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 PROK2Q9HC23 129 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 MBD3L4A6NDZ8 208 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-202ENST00000392770 MBD3L3A6NE82 208 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-202ENST00000392770 MBD3L5A6NJ08 208 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-202ENST00000392770 H3BTX0 84 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 MBD3L2Q8NHZ7 208 aaPredicted RBP13.86□□□□□ -0.19
SCN3B-202ENST00000392770 EEF1AKMT3Q96AZ1 226 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 MGPP08493 103 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 FAM166AQ6J272 317 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 OR51G1Q8NGK1 321 aa13.86□□□□□ -0.19
SCN3B-202ENST00000392770 A0A1W2PS18 150 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 PSG9Q00887 426 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 SRSF7Q16629 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCN3B-202ENST00000392770 PACRGQ96M98 296 aaPredicted RBP13.85□□□□□ -0.19
SCN3B-202ENST00000392770 TMEM189A5PLL7 270 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 OR2T8A6NH00 312 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 THBDP07204 575 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 TEX29Q8N6K0 151 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 ZNF524Q96C55 264 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 CBY3A6NI87 242 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 CGB1A6NKQ9 187 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 ZNF738Q8NE65 137 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 GGACTQ9BVM4 153 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 F8VVB4 439 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 F8VWA3 439 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 SAA1P0DJI8 122 aaPredicted RBP13.85□□□□□ -0.19
SCN3B-202ENST00000392770 IGFBP2P18065 325 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 GCHFRP30047 84 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 Q6ZS92 163 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 LINC00305Q7Z4B0 112 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 CRYBB3P26998 211 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 CCKARP32238 428 aa13.85□□□□□ -0.19
SCN3B-202ENST00000392770 FAM3BP58499 235 aaPredicted RBP13.85□□□□□ -0.19
SCN3B-202ENST00000392770 QRFPP83859 136 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 TMEM78Q5T7P6 136 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 SMAD7O15105 426 aaKnown RBP13.84□□□□□ -0.19
SCN3B-202ENST00000392770 TMEM42Q69YG0 159 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 OR10J6PQ8NGY7 276 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 ETV2O00321 342 aaPredicted RBP13.84□□□□□ -0.19
SCN3B-202ENST00000392770 MEOX2P50222 304 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 HNRNPA3P51991 378 aaKnown RBP13.84□□□□□ -0.19
SCN3B-202ENST00000392770 TMEM183BQ1AE95 376 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 TGIF2-C20orf24A0A0A6YYL0 155 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 HGFACQ04756 655 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 TWIST1Q15672 202 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 WDFY1Q8IWB7 410 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 RCC1LQ96I51 464 aaKnown RBP13.84□□□□□ -0.19
SCN3B-202ENST00000392770 PRO1933Q9H354 126 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 RPRMQ9NS64 109 aa13.84□□□□□ -0.19
SCN3B-202ENST00000392770 S4R3C0 116 aa13.83□□□□□ -0.2
SCN3B-202ENST00000392770 RRHO14718 337 aa13.83□□□□□ -0.2
SCN3B-202ENST00000392770 TMEM133Q9H2Q1 129 aa13.83□□□□□ -0.2
SCN3B-202ENST00000392770 PARLQ9H300 379 aa13.83□□□□□ -0.2
SCN3B-202ENST00000392770 RP1P56715 2156 aa13.83□□□□□ -0.2
SCN3B-202ENST00000392770 IL4P05112 153 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 ZNF343Q6P1L6 599 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 ZNF525Q8N782 197 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 ZNF506Q5JVG8 444 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 CD177Q8N6Q3 437 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 HSPB7Q9UBY9 170 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 TEX50A0A1B0GTY4 177 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 SRRM5B3KS81 715 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 BIVMQ86UB2 503 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 PLXND1Q9Y4D7 1925 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 ZDBF2Q9HCK1 2354 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 E9PQ18 207 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 UPK2O00526 184 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 OTX1P32242 354 aaPredicted RBP13.82□□□□□ -0.2
SCN3B-202ENST00000392770 RELQ04864 619 aaPredicted RBP13.82□□□□□ -0.2
SCN3B-202ENST00000392770 TM4SF20Q53R12 229 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 NUP37Q8NFH4 326 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 PTTG1IPP53801 180 aa13.82□□□□□ -0.2
SCN3B-202ENST00000392770 MFAP2P55001 183 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 SPANXN1Q5VSR9 72 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 ARPC1AQ92747 370 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 ZNF581Q9P0T4 197 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 C15orf61A6NNL5 157 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 EBLN2Q6P2I7 272 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 LHFPL5Q8TAF8 219 aa13.81□□□□□ -0.2
SCN3B-202ENST00000392770 A8MWL6 223 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms