RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 ST6GALNAC6Q969X2 333 aa12.12□□□□□ -0.47
LRRFIP1-204ENST00000392000 PLAUP00749 431 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 SUMO1P63165 101 aaKnown RBP12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 RNF114Q9Y508 228 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 A0A1W2PNU3 283 aaPredicted RBP12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 C15orf62A8K5M9 175 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 A8MXE2 369 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 TOX4O94842 621 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 HOXC12P31275 282 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 TRA2AQ13595 282 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■■■ 27.7
LRRFIP1-204ENST00000392000 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 PYGO2Q9BRQ0 406 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 ENY2Q9NPA8 101 aa12.11□□□□□ -0.47
LRRFIP1-204ENST00000392000 APELAP0DMC3 54 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 UTF1Q5T230 341 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 SAXO1Q8IYX7 474 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 STARD4Q96DR4 205 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 BRWD1-AS2P59051 145 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 TMEM183BQ1AE95 376 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 LBHQ53QV2 105 aaPredicted RBP12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 CDX2Q99626 313 aaPredicted RBP12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 SRIP30626 198 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 TCTAP57738 103 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 FOXF2Q12947 444 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 Q6ZS49 121 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 BEND2Q8NDZ0 799 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 OR2Z1Q8NG97 314 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 TP73-AS1Q9UF72 201 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 RNF24Q9Y225 148 aa12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 TBL2Q9Y4P3 447 aaKnown RBP12.1□□□□□ -0.47
LRRFIP1-204ENST00000392000 SPINT2O43291 252 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 PDE6DO43924 150 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 MIR17HGQ75NE6 70 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 LINC00479Q96M42 142 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 STRADBQ9C0K7 418 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 ZNRD1Q9P1U0 126 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 IGFBP2P18065 325 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 ATP6V1FQ16864 119 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 LRRC29Q8WV35 223 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 ZNF586Q9NXT0 402 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 ABI3Q9P2A4 366 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 DLEU1O43261 78 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 GPR6P46095 362 aaPredicted RBP12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 GNG4P50150 75 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 RPL15P61313 204 aaKnown RBP12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 SPATA45Q537H7 98 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 NANOS1Q8WY41 292 aaKnown RBP12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 RND1Q92730 232 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 COQ2Q96H96 371 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 TRIB1Q96RU8 372 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 GNB4Q9HAV0 340 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 DNAJC4Q9NNZ3 241 aa12.09□□□□□ -0.47
LRRFIP1-204ENST00000392000 H3BTX0 84 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 Q56UQ5 140 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 FBXW9Q5XUX1 488 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 MOB1BQ7L9L4 216 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 KLF14Q8TD94 323 aaPredicted RBP12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 AGMATQ9BSE5 352 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 FBXL7Q9UJT9 491 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 LYG1Q8N1E2 194 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 STPG3Q8N7X2 389 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 Q8NFD4 153 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 TMEM45BQ96B21 275 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 RCHY1Q96PM5 261 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 S1PR3Q99500 378 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 MGST2Q99735 147 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 LPAR2Q9HBW0 351 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 PCSK5Q92824 1860 aa12.08□□□□□ -0.48
LRRFIP1-204ENST00000392000 AHRRA9YTQ3 701 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 WNT2P09544 360 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 CD24P25063 80 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 HNRNPA3P51991 378 aaKnown RBP12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 TMEM164Q5U3C3 297 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 SPRR3Q9UBC9 169 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 IGKV3D-15A0A087WSY6 115 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 OOEPA6NGQ2 149 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 K7EN84 100 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 TNFSF15O95150 251 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 CCL11P51671 97 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 RBM14Q96PK6 669 aaKnown RBP12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 MCRIP2Q9BUT9 160 aaKnown RBP12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 SSBP4Q9BWG4 385 aaPredicted RBP12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 HELTA6NFD8 242 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 VENTXO95231 258 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 SP1P08047 785 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 GCHFRP30047 84 aa12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 BCL2L2Q92843 193 aaPredicted RBP12.07□□□□□ -0.48
LRRFIP1-204ENST00000392000 PIGBOS1A0A0B4J2F0 54 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 PMS2P5A8MQ11 134 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 SMPD2O60906 423 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 CD46P15529 392 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 CHRNB4P30926 498 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 RAB7AP51149 207 aa12.06□□□□□ -0.48
LRRFIP1-204ENST00000392000 LCN2P80188 198 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms