RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TPD52L1Q16890 204 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ACOT6Q3I5F7 207 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 H1FX-AS1Q4G0G2 97 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 HSP90AB2PQ58FF8 381 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 MESTQ5EB52 335 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 PDZK1Q5T2W1 519 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CFAP58Q5T655 872 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 C1QTNF12Q5T7M4 302 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ATAD3BQ5T9A4 648 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RIPPLY2Q5TAB7 128 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 FAM78BQ5VT40 261 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 PLCXD3Q63HM9 321 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CLEC6AQ6EIG7 209 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC8B1Q6J4K2 584 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CD200R1LQ6Q8B3 271 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CASC1Q6TDU7 716 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 DPPA3Q6W0C5 159 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 LINC00299Q6ZSB3 139 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ZNF833PQ6ZTB9 187 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 NDUFAF7Q7L592 441 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CMC1Q7Z7K0 106 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM123Q8N131 208 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 GAPTQ8N292 157 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 C5orf56Q8N8D9 126 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 NECAB1Q8N987 351 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 Q8NFD4 153 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 DEFB105AQ8NG35 78 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 OR4E2Q8NGC2 313 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 OR5AR1Q8NGP9 310 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 EXOC6Q8TAG9 804 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM254Q8TBM7 123 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 NT5CQ8TCD5 201 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 SMIM11BQ8TCY0 68 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 DTD1Q8TEA8 209 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CTNNBL1Q8WYA6 563 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 MAFIPQ8WZ33 124 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 KIFAP3Q92845 792 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RAB1CQ92928 201 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TUBGCP3Q96CW5 907 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RCN3Q96D15 328 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 MALSU1Q96EH3 234 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 FMC1Q96HJ9 113 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ABHD14BQ96IU4 210 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RILPQ96NA2 401 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RPRD1AQ96P16 312 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 DSCR8Q96T75 97 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 GPER1Q99527 375 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ATP5SQ99766 215 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC29A1Q99808 456 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 SHCBP1LQ9BZQ2 653 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC7A5P2Q9GIP4 190 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CCDC90BQ9GZT6 254 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 C6orf62Q9GZU0 229 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 METTL9Q9H1A3 318 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 GTSF1LQ9H1H1 148 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 MS4A6AQ9H2W1 248 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 OR51B5Q9H339 312 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 GAL3ST2Q9H3Q3 398 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ELOVL3Q9HB03 270 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 NT5MQ9NPB1 228 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 BIN3Q9NQY0 253 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 POLE4Q9NR33 117 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 COMMD8Q9NX08 183 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 UBAP1Q9NZ09 502 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ADA2Q9NZK5 511 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 HMG20BQ9P0W2 317 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 DNAJC12Q9UKB3 198 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 EPDR1Q9UM22 224 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 CHMP2BQ9UQN3 213 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 POFUT2Q9Y2G5 429 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 TIMM22Q9Y584 194 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 GREB1Q4ZG55 1949 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 ZGRF1Q86YA3 2104 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 MGAMO43451 1857 aa-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 PHRF1Q9P1Y6 1649 aaKnown RBP-0.82□□□□□ -2.54
TRAJ28-201ENST00000390509 RPGRIP1LQ68CZ1 1315 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 PLXND1Q9Y4D7 1925 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 NUP153P49790 1475 aaKnown RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TRAV10A0A0B4J240 114 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TRAV17A0A0B4J275 112 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 IGHV2OR16-5A0A0B4J2B6 119 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 A0A0B4J2E0 115 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 A0A0J9YY99 117 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 TRBV6-1A0A0K0K1D8 114 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 C9JCJ5 164 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 PSMD11O00231 422 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 GPR171O14626 319 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 AIM2O14862 343 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 RAB29O14966 203 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 XRCC2O43543 280 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 GSTZ1O43708 216 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 SC5DO75845 299 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 IGHV3-7P01780 117 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 SMR3BP02814 79 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 SLC2A1P11166 492 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 COX6A1P12074 109 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 DESP17661 470 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 IL10P22301 178 aa-0.83□□□□□ -2.54
TRAJ28-201ENST00000390509 PSMA5P28066 241 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms