RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ICAM4Q14773 271 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 ZNF506Q5JVG8 444 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 RPP25LQ8N5L8 163 aaKnown RBP14.8□□□□□ -0.04
ACTN4-202ENST00000390009 ZNF709Q8N972 641 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 HARBI1Q96MB7 349 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 NABP2Q9BQ15 211 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 ENY2Q9NPA8 101 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 WDR83OSQ9Y284 106 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 ZNF257Q9Y2Q1 563 aa14.8□□□□□ -0.04
ACTN4-202ENST00000390009 DCHS2Q6V1P9 2916 aa14.79□□□□□ -0.04
ACTN4-202ENST00000390009 RAB13P51153 203 aa14.79□□□□□ -0.04
ACTN4-202ENST00000390009 FGF8P55075 233 aaPredicted RBP14.79□□□□□ -0.04
ACTN4-202ENST00000390009 RAB11AP62491 216 aa14.79□□□□□ -0.04
ACTN4-202ENST00000390009 TMEM177Q53S58 311 aa14.79□□□□□ -0.04
ACTN4-202ENST00000390009 SLC24A4Q8NFF2 622 aa14.79□□□□□ -0.04
ACTN4-202ENST00000390009 GGACTQ9BVM4 153 aa14.79□□□□□ -0.04
ACTN4-202ENST00000390009 KBTBD11O94819 623 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 IFNA4P05014 189 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 C4orf17Q53FE4 359 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 FFAR4Q5NUL3 377 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 FLYWCH2Q96CP2 140 aaKnown RBP14.78□□□□□ -0.04
ACTN4-202ENST00000390009 HINT2Q9BX68 163 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 GNG13Q9P2W3 67 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 SMCO3A2RU48 225 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 MAP1LC3B2A6NCE7 125 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 C17orf112F2Z3M2 114 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 MBP02144 154 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 NPY1RP25929 384 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 PDPNQ86YL7 162 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 RXFP4Q8TDU9 374 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 LHX4Q969G2 390 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 MAP1LC3BQ9GZQ8 125 aa14.78□□□□□ -0.04
ACTN4-202ENST00000390009 HSPB1P04792 205 aaKnown RBP14.77□□□□□ -0.04
ACTN4-202ENST00000390009 SRP19P09132 144 aaKnown RBP14.77□□□□□ -0.04
ACTN4-202ENST00000390009 GNLYP22749 145 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 PRCDQ00LT1 54 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 KHDC3LQ587J8 217 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 SOHLH1Q5JUK2 328 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 TGIF2LXQ8IUE1 241 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 Q8N7P7 452 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 OR8B3Q8NGG8 313 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 OR4C13Q8NGP0 309 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 ITLN2Q8WWU7 325 aaPredicted RBP14.77□□□□□ -0.04
ACTN4-202ENST00000390009 OR8B2Q96RD0 313 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 PLEKHA3Q9HB20 300 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 SLC39A9Q9NUM3 307 aa14.77□□□□□ -0.04
ACTN4-202ENST00000390009 LOC102723971A0A1B0GUV8 181 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 EIF3GO75821 320 aaKnown RBP eCLIP14.77□□□□□ -0.054e-7■□□□□ 10.8
ACTN4-202ENST00000390009 OPN1MWP04001 364 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 OPN1MW2P0DN77 364 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 OPN1MW3P0DN78 364 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 PLA2G5P39877 138 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 DLK1P80370 383 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 AKIRIN2Q53H80 203 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 OR10G4Q8NGN3 311 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 OR10G9Q8NGN4 311 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 OR10G7Q8NGN6 311 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 NEU4Q8WWR8 484 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-202ENST00000390009 FKBP11Q9NYL4 201 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 MIOXQ9UGB7 285 aa14.77□□□□□ -0.05
ACTN4-202ENST00000390009 IGHV2-26A0A0B4J1V2 119 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 PPIAL4CA0A0B4J2A2 164 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 TEX50A0A1B0GTY4 177 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 A0A1W2PPH5 198 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 ZFP92A6NM28 416 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 CA2P00918 260 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 PPIAL4GP0DN37 164 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 DLX1P56177 255 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 WDR25Q64LD2 544 aaPredicted RBP14.76□□□□□ -0.05
ACTN4-202ENST00000390009 TREML4Q6UXN2 200 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 TNFRSF14Q92956 283 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 NEIL1Q96FI4 390 aaPredicted RBP14.76□□□□□ -0.05
ACTN4-202ENST00000390009 PCGF1Q9BSM1 259 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 SLC25A22Q9H936 323 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 WASHC3Q9Y3C0 194 aa14.76□□□□□ -0.05
ACTN4-202ENST00000390009 A0A1W2PPR1 153 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 TMEM8BA6NDV4 472 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 MPDU1O75352 247 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 FBP1P09467 338 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 BCL2P10415 239 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 IL3RAP26951 378 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 AWAT1Q58HT5 328 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 DTX2Q86UW9 622 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 OR5B3Q8NH48 314 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 C8orf46Q8TAG6 207 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 RAB1CQ92928 201 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 TIMD4Q96H15 378 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 UNKLQ9H9P5 680 aaKnown RBP14.75□□□□□ -0.05
ACTN4-202ENST00000390009 BIN3Q9NQY0 253 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 CTXND1A0A1B0GTU2 59 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 S100A12P80511 92 aa14.75□□□□□ -0.05
ACTN4-202ENST00000390009 M0R036 132 aa14.74□□□□□ -0.05
ACTN4-202ENST00000390009 IGLV1-47P01700 117 aa14.74□□□□□ -0.05
ACTN4-202ENST00000390009 CEBPGP53567 150 aa14.74□□□□□ -0.05
ACTN4-202ENST00000390009 CYB561D1Q8N8Q1 229 aa14.74□□□□□ -0.05
ACTN4-202ENST00000390009 C20orf24Q9BUV8 137 aa14.74□□□□□ -0.05
ACTN4-202ENST00000390009 HMGB3O15347 200 aaKnown RBP14.74□□□□□ -0.05
ACTN4-202ENST00000390009 RBP4P02753 201 aa14.74□□□□□ -0.05
ACTN4-202ENST00000390009 RPL8P62917 257 aaKnown RBP14.74□□□□□ -0.05
ACTN4-202ENST00000390009 PRB3Q04118 309 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms